Top 10 Hotels in Elgin, MN (from $63) 2026 - Competitive Prices

Go beyond your typical stay in Elgin

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Our top choices for Elgin hotels

A restaurant with wooden tables and bar stools, a bar area with a counter, and multiple televisions mounted on the walls.

An indoor swimming pool with a slide, seating area, and a large frog statue.

A modern kitchen with wooden cabinets, a microwave, an oven, and a dishwasher.

A bar with wooden stools and a neon sign.

1. AmericInn by Wyndham Rochester Near Mayo Clinic

Rochester

Cathy

$77 nightly

$89 total

Sep 18 - Sep 19

Total with taxes and fees

A hotel room with a large bed, a desk, a chair, a TV, and a window with curtains.

A hotel room with a large window, a clock, a framed picture of pottery, a desk with a computer, and a seating area with patterned chairs.

A Microtel Inn & Suites building with a signboard, a parking lot, and a clear sky.

A compact hotel room with a kitchenette, a dining area, a sofa, and a bed.

2. Microtel Inn & Suites by Wyndham Rochester North Mayo Clinic

Rochester

Siddhartha

$70 nightly

$80 total

Sep 12 - Sep 13

Total with taxes and fees

A modern dining area with high tables, chairs, and pendant lighting.

A swimming pool with a tiled deck, sun loungers, and a lifeguard chair.

A hotel room with two beds, a desk with a computer, a chair, and a window with a view.

A reception desk with a large digital screen displaying a cityscape and the word "happy."

3. Hampton Inn & Suites Rochester-North

Rochester

Dr. Tim

$103 nightly

$118 total

Sep 27 - Sep 28

Total with taxes and fees

A Holiday Inn Express building with a covered entrance, outdoor seating area, and a well-lit facade.

A hotel dining area with multiple tables and chairs, a coffee station, and a seating area with sofas.

A coffee station with two espresso machines and a variety of coffee pods and cups.

A hotel room with two beds, a desk, a chair, a television, and a kitchenette.

4. Holiday Inn Express & Suites Rochester – Mayo Clinic Area by IHG

Kutzky Park

Janet

$101 nightly

$116 total

Sep 18 - Sep 19

Total with taxes and fees

A modern lobby with a reception desk, a green sofa, and a black spherical table.

An indoor dining area with wooden ceiling beams, large windows, and modern furniture.

A modern hotel with a prominent 'Hotel Indigo' sign, a 'Crave Drink' restaurant, and a well-lit facade.

An outdoor dining area with wooden beams, tables, and chairs.

5. Hotel Indigo Rochester – Mayo Clinic Area by IHG

Downtown Rochester

Kyle

$103 nightly

$119 total

Oct 3 - Oct 4

Total with taxes and fees

An indoor swimming pool with slides, seating areas, and a covered section with umbrellas.

A hotel room with two beds, a desk with a chair, a TV, and a window with curtains.

A hotel room with a kitchen area, a bed, a TV, and a seating area.

A modern kitchen with granite countertops, a built-in microwave, and a sink. There are two wooden chairs and a small table.

6. Best Western Rochester Hotel Mayo Clinic Area/St. Mary's

Rochester

Margita

$94 nightly

$108 total

Sep 18 - Sep 19

Total with taxes and fees

An outdoor patio area with yellow umbrellas, wicker furniture, and a sign for Centerstone Plaza Hotel.

A modern living room with a dark wall, a decorative light fixture, and a patterned wall art piece.

A modern reception area with a wooden reception desk, glass pendant lights, and a long hallway with seating.

A restaurant interior with wooden tables, chairs, and a stone wall.

7. Centerstone Plaza Hotel Soldiers Field - Mayo Clinic Area

Historic Southwest

Carrie

$108 nightly

$124 total

Sep 11 - Sep 12

Total with taxes and fees

An outdoor seating area with a fire feature, blue cushioned chairs, and a modern building with large windows in the background.

A modern dining area with round tables and chairs, a large painting on the wall, and a flat-screen TV mounted above a geometric-patterned wall.

A modern indoor pool area with lounge chairs and a pool.

A modern Hyatt House hotel with a prominent 'Hyatt House' sign, multiple floors, and a parking garage.

8. Hyatt House Rochester/Mayo Clinic Area

Downtown Rochester

Mary Jo

$118 nightly

$136 total

Oct 2 - Oct 3

Total with taxes and fees

An outdoor patio area with a concrete floor, wooden fence, and string lights.

A modern living room with a stone fireplace, a blue armchair, a round coffee table, and a large window offering a view of the outdoors.

A breakfast bar with a wooden counter, a coffee machine, and a refrigerator.

9. Fairfield Inn & Suites Rochester Mayo Clinic Area/St. Marys

Kutzky Park

Jon

$112 nightly

$128 total

Sep 18 - Sep 19

Total with taxes and fees

A Comfort Inn hotel with a stone facade, a covered entrance, and a parking area.

A modern dining area with wooden tables and chairs, a kitchen with granite countertops, and a view of the outdoors through large windows.

A spacious lobby with a central seating area, a reception desk, and a fireplace.

A spacious living room with a stone fireplace, blue sofas, and a flat-screen TV.

10. Comfort Inn & Suites West - Medical Center

Rochester

Gary

$84 nightly

$97 total

Sep 19 - Sep 20

Total with taxes and fees

A spacious hotel lobby with multiple seating areas, including sofas and round tables, and a large dining area with yellow chairs.

A hotel room with a blue sofa, a wooden bench, a small table with a lamp, a painting of a flower, and a kitchenette in the background.

A reception area with two counters, a patterned wall, and a wooden floor.

A spacious lobby with a large seating area, a fireplace, and large windows providing natural light.

11. Hilton Garden Inn Rochester Downtown, MN

Downtown Rochester

BRIAN

$114 nightly

$131 total

Sep 18 - Sep 19

Total with taxes and fees

An indoor swimming pool with clear water, wooden flooring, and a ceiling with wooden beams and lights.

A room with a TV mounted on the wall, a wooden table, and two patterned armchairs.

A gym with treadmills, an elliptical, and a water station.

A café with multiple tables and chairs, a kitchen area with appliances, and a clock on the wall.

12. Med City Inn & Suites - Mayo Clinic Area

Kutzky Park

Hailey

$71 nightly

$82 total

Sep 10 - Sep 11

Total with taxes and fees

A reception area with a wooden reception desk, a "Welcome to the Bread & Butter State" sign, and a "Please Center" sign.

A hotel room with a bed, a desk, a chair, a TV, and a bathroom visible through an open door.

A coffee station with four coffee dispensers, a stack of disposable cups, and a tray with various coffee-related items.

A pool area with a table and chairs, a lifeguard chair, and a pool lift.

13. Hampton Inn Rochester-South

Rochester

Lynne

$94 nightly

$109 total

Oct 1 - Oct 2

Total with taxes and fees

An indoor swimming pool with a dolphin sculpture, wooden ceiling, and clear windows.

A hotel reception area with a coffee station, seating area, and a fireplace.

A hotel reception area with a red 'Hello' sign, a reception desk, a coffee station, and a fireplace.

A hotel room with a large bed, two bedside tables with lamps, a telephone, and a window with sheer curtains.

14. TownePlace Suites by Marriott Rochester

Rochester

Terry

$98 nightly

$113 total

Oct 2 - Oct 3

Total with taxes and fees

A modern outdoor seating area with a built-in fireplace, two wooden chairs, a table, and a sofa.

A modern kitchen with a central island, bar stools, and pendant lighting. A living area with a sofa, ottoman, and a view of the outdoors is visible.

A hotel room with a kitchenette, a bed, a sofa, a small table, and a window with curtains.

A modern interior with a dining area, a kitchen, and a pantry stocked with snacks.

15. Staybridge Suites Rochester - Mayo Clinic Area by IHG

Kutzky Park

matthew

$117 nightly

$134 total

Sep 18 - Sep 19

Total with taxes and fees

A modern indoor patio with a fire feature, seating, and large windows.

A reception area with a curved reception desk, wooden shelving, and a green moss wall with the text "I ♥ EVEN".

A modern hotel lobby with a large glass wall, a green wall mural, and a seating area with sofas and chairs.

A modern living room with a fireplace, large windows, and a flat-screen TV mounted on the wall.

16. EVEN Hotel Rochester - Mayo Clinic Area by IHG

Kutzky Park

Ashley

$130 nightly

$149 total

Oct 3 - Oct 4

Total with taxes and fees

A Courtyard Marriott hotel with multiple floors, a brick facade, and illuminated signage.

A hotel room with a bed, a sofa, a desk, a TV, and a wall art piece.

A modern living room with a sofa, a round coffee table, and a side table. There are large windows with a view of the outside.

A conference room with a long table, multiple chairs, and decorative wall art.

17. Courtyard by Marriott Rochester Mayo Clinic Area/Saint Marys

Kutzky Park

MATTHEW

$104 nightly

$119 total

Sep 18 - Sep 19

Total with taxes and fees

A room with a fireplace, two leather armchairs, a sofa, and a large window providing a view of the outdoors.

A long, narrow hotel corridor with a carpeted floor, light fixtures along the walls, and a ceiling with recessed lighting.

A paved garden area with two benches, a potted plant with yellow flowers, and a variety of greenery.

A reception area with a curved counter, ceiling lights, and a potted plant.

18. Brentwood Inn & Suites

Downtown Rochester

Richard

$106 nightly

$122 total

Sep 10 - Sep 11

Total with taxes and fees

A self-service breakfast station with a waffle maker, coffee machines, and a variety of condiments.

A reception area with a wooden reception desk, a red doormat, and framed awards on the wall.

A hotel room with a large bed, a desk, a chair, a television, and a window with curtains.

A compact laundry area with a washing machine, dryer, and a water fountain.

19. Econo Lodge Mayo Clinic Area

Rochester

James

$70 nightly

$81 total

Oct 4 - Oct 5

Total with taxes and fees

A modern hotel lobby with a reception desk, seating area, and a dining space.

A hotel room with a bed, desk, chair, and a bathroom.

A modern hotel room with a wooden desk, orange chair, dark sofa, and a small table.

A modern breakfast area with a counter displaying various food items, a water dispenser, and a sign indicating a bakery section.

20. Holiday Inn Express Rochester South - Mayo Area by IHG

Rochester

Dezel

$100 nightly

$115 total

Oct 1 - Oct 2

Total with taxes and fees

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Top Elgin Hotel Reviews

Best Western Rochester Hotel Mayo Clinic Area/St. Mary's

10/10 Excellent

"Nice big room with 2 Queen beds, sofa and walk in area with sink area"

Med City Inn & Suites - Mayo Clinic Area

8/10 Good

"Very good stay. I found the wifi to be excellent and the motel was served by a free shuttle to the Mayo Clinic. I have stayed here several times in the past and like the property. It is also directly connected to Famous Dave's Bar-B-Que where guests receive a discount."

Comfort Inn & Suites Rochester South Mayo Clinic

10/10 Excellent

"Clean room and comfortable bed. Enjoyed our overnight stay."

Centerstone Plaza Hotel Soldiers Field - Mayo Clinic Area

10/10 Excellent

"The hotel and staff were great. The pool area is one of the best I've seen. It even has a small pool for the kids. The hot tub was great and he pool was warm which made it more enjoyable. Twigs restaurant on site was phenomenal. If you love ribs you have to get them. I will definitely be going back."

SpringHill Suites by Marriott Rochester-Mayo Clinic/St Marys

8/10 Good

"Good"

EVEN Hotel Rochester - Mayo Clinic Area by IHG

10/10 Excellent

"Wish breakfast was included in the room price but great hotel and not too far from Mayo Clinic they do have a shuttle service"

Hampton Inn Rochester-South

10/10 Excellent

"Would recommend!!!"

Aspen Select

10/10 Excellent

"The room had everything we needed.Restaurant right next Door.We would return."

Hyatt House Rochester/Mayo Clinic Area

8/10 Good

"Great location, 5 minute walk to Mayo. Great pillows, cold AC! Both very important to us. 4th floor patio is awesome. Staff is very friendly and helpful! Breakfast was also very good. Forgot to mention, with all of the construction around Mayo, this place was super easy to get in and out of."

More cheap stays in Elgin

Birch Hill Suite Rochester – Med City

3595 Commercial Drive SW Rochester MN

$64 nightly

$74 total

Oct 4 - Oct 5

Total with taxes and fees

Med City Inn & Suites - Mayo Clinic Area

435 16th Ave Nw Rochester MN

$71 nightly

$82 total

Sep 10 - Sep 11

Total with taxes and fees

Comfort Inn & Suites Rochester South Mayo Clinic

7320 Airport View Dr Sw Rochester MN

$88 nightly

$101 total

Oct 4 - Oct 5

Total with taxes and fees

8.8/10 Excellent! (1,010 reviews)

Best Western Rochester Hotel Mayo Clinic Area/St. Mary's

1517 16th St Sw Rochester MN

$94 nightly

$108 total

Sep 18 - Sep 19

Total with taxes and fees

8.2/10 Very Good! (1,013 reviews)

Holiday Inn Express Rochester South - Mayo Area by IHG

4141 Maine Avenue SE Rochester MN

$100 nightly

$115 total

Oct 1 - Oct 2

Total with taxes and fees

Brentwood Inn & Suites

123 Fourth Ave. NW Rochester MN

$106 nightly

$122 total

Sep 10 - Sep 11

Total with taxes and fees

8.8/10 Excellent! (1,001 reviews)

Hotels in Elgin with star-rating

Frequently asked questions

What is the best area to stay in Elgin?

The best area to stay in Elgin is near its downtown core, particularly around Main Street and Quintana Street.This central area offers convenient access to local businesses and services. You'll find a selection of local eateries and shops within walking distance, and it serves as a central point for exploring the town.For travelers seeking a quiet and convenient base, staying in this central area is ideal.

When is the best time to go to Elgin?

The best time to visit Elgin is during the late spring and early fall months, specifically May, June, September, and October.These months offer pleasant weather conditions, with comfortable temperatures that are ideal for outdoor activities and exploring the area without the extreme heat of summer or the cold of winter. You'll find fewer crowds compared to peak summer, allowing for a more relaxed experience at local attractions and events.For those interested in agricultural experiences, late summer and early fall (August to October) are excellent. This period often coincides with local harvest festivals and opportunities to visit orchards and farms, which are prominent in the Elgin area. Families can enjoy pumpkin patches and apple picking, making it a memorable trip for all ages.If you're a couple looking for a quiet getaway, May and early June offer blooming landscapes and serene settings, superb for enjoying the natural beauty and local wineries.

Can I cancel my hotel reservation on Expedia?

You can cancel your hotel reservation on Expedia, though it depends on the cancellation policy of your booking. Most bookings are refundable if canceled within 24-48 hours of the scheduled arrival. Be sure to check your booking confirmation for the exact cancellation policy. If free cancellation is available, you can cancel directly through your Expedia account by logging in, going to "My Trips", and selecting your reservation. To find flexible deals, filter your search by "Fully refundable property" for hotels in Elgin.

How much is the nightly rate at a Elgin hotel?

Prices for hotels in Elgin often vary, but you can find a great deal from $63 on Expedia. All sorts of factors affect price, such as the time of year or the days of the week you choose for your stay. Find the best deals by being flexible with your dates, and sort search results by "Price: low to high" for the cheapest rate.

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Go beyond your typical stay in Elgin

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Our top choices for Elgin hotels

1. AmericInn by Wyndham Rochester Near Mayo Clinic

2. Microtel Inn & Suites by Wyndham Rochester North Mayo Clinic

3. Hampton Inn & Suites Rochester-North

4. Holiday Inn Express & Suites Rochester – Mayo Clinic Area by IHG

5. Hotel Indigo Rochester – Mayo Clinic Area by IHG

6. Best Western Rochester Hotel Mayo Clinic Area/St. Mary's

7. Centerstone Plaza Hotel Soldiers Field - Mayo Clinic Area

8. Hyatt House Rochester/Mayo Clinic Area

9. Fairfield Inn & Suites Rochester Mayo Clinic Area/St. Marys

10. Comfort Inn & Suites West - Medical Center

11. Hilton Garden Inn Rochester Downtown, MN

12. Med City Inn & Suites - Mayo Clinic Area

13. Hampton Inn Rochester-South

14. TownePlace Suites by Marriott Rochester

15. Staybridge Suites Rochester - Mayo Clinic Area by IHG

16. EVEN Hotel Rochester - Mayo Clinic Area by IHG

17. Courtyard by Marriott Rochester Mayo Clinic Area/Saint Marys

18. Brentwood Inn & Suites

19. Econo Lodge Mayo Clinic Area

20. Holiday Inn Express Rochester South - Mayo Area by IHG

Top Elgin Hotel Reviews

Best Western Rochester Hotel Mayo Clinic Area/St. Mary's

Med City Inn & Suites - Mayo Clinic Area

Comfort Inn & Suites Rochester South Mayo Clinic

Centerstone Plaza Hotel Soldiers Field - Mayo Clinic Area

SpringHill Suites by Marriott Rochester-Mayo Clinic/St Marys

EVEN Hotel Rochester - Mayo Clinic Area by IHG

Hampton Inn Rochester-South

Aspen Select

Hyatt House Rochester/Mayo Clinic Area

More cheap stays in Elgin

Birch Hill Suite Rochester – Med City

Med City Inn & Suites - Mayo Clinic Area

Comfort Inn & Suites Rochester South Mayo Clinic

Best Western Rochester Hotel Mayo Clinic Area/St. Mary's

Holiday Inn Express Rochester South - Mayo Area by IHG

Brentwood Inn & Suites

Hotels in Elgin with star-rating

Frequently asked questions

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