Cheap Flights from San Diego (SAN) to San Rafael (AFA)

Popular airlines from San Diego Intl. Airport (SAN) to San Rafael (AFA)

Frequently asked questions

How much does a flight from San Diego Intl. Airport (SAN) to San Rafael Airport (AFA) cost?
Lock in a cheap one-way flight or cheap return flight from San Diego Intl. Airport (SAN) to San Rafael Airport (AFA) with Expedia. Enter your travel dates and sort by "Price (lowest to highest)" to find our cheapest flight offers on this route.
What is the cheapest month to fly from San Diego Intl. Airport (SAN) to San Rafael Airport (AFA)?
Traveling in can help you save, as it's the cheapest month for flights between SAN and AFA. You'll often find the lowest prices during off-peak months.
What is the cheapest airline that flies from San Diego Intl. Airport (SAN) to San Rafael Airport (AFA)?
Use the filter tool on Expedia to compare different airlines and find the cheapest carrier that'll take you from SAN to AFA. Then, sort your results by "Price (lowest to highest)" to pick up a good deal.
How many flights per day from San Diego Intl. Airport (SAN) to San Rafael Airport (AFA)?
You'll need to hop on a flight with a layover when traveling from San Diego Intl. Airport (SAN) to San Rafael Airport (AFA). There are no daily direct flights on this route. However, just filter your search to include one or two stops to discover an option that works for you.
What day of the week has the most flights from SAN to AFA?
Usually you'll find the greatest selection of flight options on a Friday. Tuesdays are often the quietest.* However, this can vary based on the season, airline and other factors.*Busiest/quietest day to travel is based on Expedia flight demand through January to December 2024.
What is the best time to fly from San Diego Intl. Airport (SAN) to San Rafael Airport (AFA)?
To avoid possible delays on the San Diego Intl. Airport (SAN) to San Rafael Airport (AFA) route, travel before 3 PM. Later flights have a 22% higher chance of cancellation.**Most reliable time of the day and month to travel recommendation is based on January through August 2024 flight status data sourced from OAG's global flight data platform.
Is it cheaper to buy a plane ticket from San Diego Intl. Airport (SAN) to San Rafael Airport (AFA) last-minute?
Holding off until just before your departure to book a flight from SAN to AFA often results in higher prices. While you might find some last-minute offers, they're not always guaranteed. Keep your travel plans flexible to maximize your chances of landing a bargain.
Is it cheaper to book a SAN to AFA flight and hotel package?
Booking a SAN to AFA flight and hotel package tends to be cheaper than booking separately. With Expedia, you can enjoy the convenience of organizing your travels all in one place. Choose from our extensive range of hotels and then add flights, car rentals and activities to your booking. Bundle everything together, and you could save hundreds of dollars.
Can I cancel or change the date of my flight from San Diego Intl. Airport (SAN) to San Rafael Airport (AFA)?
If you booked your SAN to AFA flight within the last 24 hours, you may be able to cancel or modify it without any fees. Depending on the airline and the type of ticket you purchased, additional charges may apply for changes beyond this timeframe. Airline policies and contact information can be found in your itinerary or confirmation email. Or, go to our Customer Service portal if you'd like more information.

Travel information

Origin airport
San Diego Intl.
Destination airport
San Rafael
Distance
5625 mi

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San Diego to San Rafael Flights

The cheapest times to fly from San Diego to San Rafael

On average, Thursday can be the cheapest time to fly, according to data from the Airlines Reporting Corporation (ARC), one of the world's biggest databases for global airline sales. The data reveals that you could save up to 16% by flying on a Thursday—the cheapest day to travel on average—instead of a Sunday—the most expensive. Some of the most affordable flights from San Diego to San Rafael are during the month of . You can find some of the cheapest flights from San Diego to San Rafael with Expedia's search tool and vast selection of airlines.

 

The best time to book a flight from San Diego to San Rafael

Sunday is one of the best days to book for cheap flights from San Diego to San Rafael: Tickets reserved on a Sunday cost between 6% and 13% less than those reserved on a Friday, according to ARC data. The data also suggests booking early can also lead to cheaper airfares. You could save 24% by buying your tickets for domestic flights at least a month in advance and 10% by booking international flights 2 months in advance.

 

How to find cheap round-trip tickets from San Diego to San Rafael

Being flexible with your dates and using Expedia's Price Drop Protection and Price Tracking features are some of the best ways of finding a cheap ticket from San Diego to San Rafael in 2025. You can also book with separate airlines for your outbound and return journeys, from one-way. Expedia also offers Price Drop Protection, so if the cost of your airfare goes down after booking, you'll receive a credit for the difference*. This is available for a small fee, and is free to One Key Gold and Platinum tier members.

 

Expedia's Price Tracking feature means you can stay on top of airfares without manually checking every day. It sends you automated price alerts for cheap San Diego to San Rafael flights and uses historical data to indicate when the best time to book is. Download Expedia's free app to activate this handy tool in a few easy taps.

 

You could also save big by booking one of Expedia's vacation packages. Bundling together your San Diego to San Rafael airfare with your accommodations and car rental is often cheaper than booking everything separately. There’s also One Key, Expedia's generous rewards program. Join for free and you could earn One Key cash on most bookings to save on future adventures.

 

*Terms apply.

 

Disclaimer: ARC The statistics are based on average round-trip ticket prices between January and August 2023. The percentages you see are averages.

 

San Diego to San Rafael Flights

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*Available to One Key members.