Find hotels near Mission Bay, San Diego from $72

    Plan, book, stay with confidence
    bex rewards loyalty icon
    Be picky
    Search almost a million properties worldwide
    one key icon
    Treat yourself
    Save instantly and earn perks with One Key
    Learn about One Key
    today icon
    Change your mind
    Book hotels with free cancellation

Filter by

Popular filters
Popular filters
Guest rating
Guest rating
Star rating
Payment type
Payment type
Property type
Property type
Neighborhood
Neighborhood
Popular locations
1
Popular locations
Meal plans available
Meal plans available
Amenities
Amenities
Accessibility
Accessibility
Traveler experience
Traveler experience

Compare 7,026 hotels close to Mission Bay with room rates, reviews, and availability. Most hotels are fully refundable.

Aerial view
Paradise Point Resort & Spa
4.0 star property
8.4 out of 10, Very Good, (1828)
"Access to the beach "
The price is $199
$270 total
includes taxes & fees
May 15 - May 16
Paradise Point Resort & Spa
Aerial view
The Dana on Mission Bay
3.5 star property
8.6 out of 10, Excellent, (2431)
"It was my birthday as the staff overheard us mention it and brought me a piece of cake with a candle and fruit with a glass of wine. I felt very special."
The price is $179
$202 total
includes taxes & fees
May 14 - May 15
The Dana on Mission Bay
Pool
California Suites Hotel
2.0 star property
7.0 out of 10, Good, (1319)
"Everything was nice"
The price is $98
$111 total
includes taxes & fees
May 14 - May 15
California Suites Hotel
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free
Outdoor pool, open 9:00 AM to 9:00 PM, cabanas (surcharge)
San Diego Mission Bay Resort
4.0 star property
8.2 out of 10, Very Good, (1018)
"Very beautiful property "
The price is $215
$286 total
includes taxes & fees
May 27 - May 28
San Diego Mission Bay Resort
Outdoor pool
Mission Bay Inn San Diego
2.5 star property
7.4 out of 10, Good, (1016)
"For the price and the free breakfast, this is such a good deal. "
The price is $89
$101 total
includes taxes & fees
May 27 - May 28
Mission Bay Inn San Diego
Lobby
Catamaran Resort and Spa
4.0 star property
7.8 out of 10, Good, (1118)
"Loved the property! Got a first floor bay front room, totally worth it. Beautiful scenery, walks paths and beach access, food options everywhere. The staff were a little on the grumpy side aside from the bellhop and valet workers...we'll definitely stay again. "
The price is $219
$291 total
includes taxes & fees
May 14 - May 15
Catamaran Resort and Spa
Balcony view
La Jolla Shores Hotel
3.0 star property
8.8 out of 10, Excellent, (1274)
"Everything was great...except that the room smelled like mold. And they did not have a microwave in the room."
The price is $331
$409 total
includes taxes & fees
May 25 - May 26
La Jolla Shores Hotel
Outdoor pool, pool umbrellas, sun loungers
Handlery Hotel
3.5 star property
7.8 out of 10, Good, (1569)
"I was in a quiet area."
The price is $128
$145 total
includes taxes & fees
May 27 - May 28
Handlery Hotel
Outdoor pool, open 7:00 AM to 10:00 PM, sun loungers
Old Town Inn
2.5 star property
9.2 out of 10, Wonderful, (1345)
"was very close to where we wanted to be"
The price is $175
$197 total
includes taxes & fees
May 14 - May 15
Old Town Inn
Outdoor pool
Hampton Inn San Diego/Mission Valley
2.5 star property
8.6 out of 10, Excellent, (1002)
"Nothing"
The price is $135
$152 total
includes taxes & fees
May 27 - May 28
Hampton Inn San Diego/Mission Valley
Meeting facility
Four Points by Sheraton San Diego
3.5 star property
7.8 out of 10, Good, (1002)
"Rooms were very noisy , with being able to hear neighbors all night long. People were talking and yelling at all hours, and management did nothing to stop them."
The price is $125
$141 total
includes taxes & fees
May 30 - May 31
Four Points by Sheraton San Diego
Outdoor pool, open 9:00 AM to 10:00 PM, sun loungers
Residence Inn by Marriott San Diego Sorrento Mesa/Sorrento Valley
3.0 star property
8.8 out of 10, Excellent, (555)
"A little piece of home on the road. Wish we could have stayed a week. Service, room, and food were great."
The price is $151
$170 total
includes taxes & fees
May 19 - May 20
Residence Inn by Marriott San Diego Sorrento Mesa/Sorrento Valley
BBQ/picnic area
Holiday Inn Express & Suites La Jolla – Windansea Beach, an IHG Hotel
2.5 star property
8.8 out of 10, Excellent, (1003)
"Property is a great location. Nice walking distance to the beach. The breakfast was pretty good. Just sometimes it gets a bit noisy staying on the 1st floor late at night. Overall great stay!! Would come back. "
The price is $175
$197 total
includes taxes & fees
May 21 - May 22
Holiday Inn Express & Suites La Jolla – Windansea Beach, an IHG Hotel
Exterior
E-Z 8 Motel Old Town
2.5 star property
5.8 out of 10, (2031)
"My room was very clean, and there staff are very nice and helpful hight security made everything safe at night for guests, if like me a reasonable rate choices together with a very clean environment..."
The price is $87
$98 total
includes taxes & fees
May 14 - May 15
E-Z 8 Motel Old Town
Lobby
Riverleaf Inn Mission Valley
2.5 star property
5.8 out of 10, (1215)
"The front clerk is very polite and helpful"
The price is $82
$92 total
includes taxes & fees
May 14 - May 15
Riverleaf Inn Mission Valley
Front of property - evening/night
Pantai Inn
3.5 star property
9.4 out of 10, Exceptional, (882)
"This was a lovely property. Beautiful location. We enjoyed our stay and will definitely be back."
The price is $258
$313 total
includes taxes & fees
May 14 - May 15
Pantai Inn
Flat-screen TV, pay movies
Hotel La Jolla, Curio Collection by Hilton
4.0 star property
8.0 out of 10, Very Good, (1007)
"Out of the 4 hotels we stayed at on our 10 day vacation this was my favorite! Clean, great location, easy parking, and the staff was very nice and helpful!"
The price is $229
$286 total
includes taxes & fees
May 19 - May 20
Hotel La Jolla, Curio Collection by Hilton
Aerial view
Grande Colonial Hotel
4.0 star property
9.4 out of 10, Exceptional, (1001)
"Location in the heart of the cove is the perfect place to experience La Jolla. Our room in the main building was more than ample and we especially appreciated that valet parking was included. Restaurant is pricey but well worth the price, Just a lovely time in a historic spot."
The price is $249
$331 total
includes taxes & fees
May 19 - May 20
Grande Colonial Hotel
Lobby
Travelodge by Wyndham San Diego SeaWorld
2.0 star property
5.6 out of 10, (1002)
"We checked in late. The late night attendant said I would have to leave my ID because their system was updating. I wasn't going to sleep without my ID so I waited for him to call me when the system was back up."
The price is $72
$81 total
includes taxes & fees
May 19 - May 20
Travelodge by Wyndham San Diego SeaWorld
Lobby
Americas Best Value Inn Loma Lodge
2.0 star property
6.6 out of 10, (1003)
"Didn't like that the maid unlocked my door after a light knock. I walked over to the door as she was opening it. Needless to say i was naked and about to shower. She asked if i needed service and i kindly told her no and she walked away. 2nd lock needed on door."
The price is $84
$93 total
includes taxes & fees
May 14 - May 15
Americas Best Value Inn Loma Lodge
Don't see what you're looking for?
See all available properties in Mission Bay
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Hotels near Other San Diego Attractions

Image for North Cove Beach

North Cove Beach

Why not spend a lazy afternoon at North Cove Beach during your trip to San Diego? Experience the acclaimed theater scene and fascinating museums in this walkable area.

See properties
North Cove Beach

Frequently asked questions

What's the area like around Mission Bay?

Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, check out the 62 hotels and other accommodations you'll find within a mile.

Where is the best place to stay near Mission Bay?

Paradise Point Resort & Spa is one of the top choices for your stay based on our traveler data, and this resort offers a marina and 5 outdoor pools. It's located just a short 0.7 mi (1.2 km) from Mission Bay. Another good option is San Diego Mission Bay Resort, located just 1 mi (1.6 km) away.

How many hotels can I expect to find close to Mission Bay?

Expedia has 62 hotels and other accommodations within a mile from Mission Bay.

If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?

Yes! You'll find that most hotel bookings are fully refundable provided that you cancel before the hotel’s cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If your reservation is non-refundable, you may still be able to cancel and be given a refund within 24 hours of booking. Enter your dates, click on "Search", then filter by "fully refundable" to review the top deals on offer near Mission Bay.

Where can I learn more about changing or cancelling my trip in the area near Mission Bay?

For more details about picking new dates or cancelling your stay near Mission Bay, head over to our customer service page.

What can I see and do near Mission Bay?

Study the collections at Maritime Museum of San Diego, Whaley House Museum, or Junipero Serra Museum. Casa de Machado y Stewart, McCoy Museum House, and Casa de Estudillo are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, Cygnet Theater Company, and Red Spade Theater.

Recent reviews of Mission Bay hotels
Expedia verified reviews

Paradise Point Resort & Spa

Paradise Point Resort & Spa

5/5 Excellent
"Access to the beach "
A verified traveler stayed at Paradise Point Resort & Spa
Posted 10 hours ago
Paradise Point Resort & Spa