Top 10 Hotels in Wynot, NE (from $76) 2026 - Competitive Prices

Go beyond your typical stay in Wynot

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Our top choices for Wynot hotels

A spacious kitchen with a large island, modern pendant lights, and a ceiling fan.

Two people sitting on Adirondack chairs facing a lake, with picnic tables and benches in the background.

A spacious room with wooden walls and ceiling, featuring a large chandelier, multiple windows, and a central seating area with tables and chairs.

A modern kitchen with dark cabinets, stainless steel appliances, and a large window.

1. Lewis and Clark Resort

Yankton

TREVOR

$113 nightly

$120 total

Nov 1 - Nov 2

Total with taxes and fees

A hotel room with a bed, a desk, a chair, a lamp, and a bathroom visible through an open door.

A spa area with a hot tub, seating, and a view of the parking lot.

A Comfort Inn hotel with a covered entrance, a parking lot, and a clear sky.

A hotel reception area with a long counter, coffee machines, and a television screen displaying a program.

2. Comfort Inn Yankton SD

Yankton

Michael

$95 nightly

$105 total

Nov 15 - Nov 16

Total with taxes and fees

A lobby with a stone fireplace, leather seating, a bar area, and a staircase.

A bar area with a long counter, multiple stools, and hanging glassware.

An indoor swimming pool with a slide, a basketball hoop, and a covered seating area.

A Best Western hotel with a modern facade, large glass windows, and a well-lit entrance.

3. Best Western Kelly Inn

Yankton

Donna

$106 nightly

$117 total

Nov 1 - Nov 2

Total with taxes and fees

A hotel room with two beds, a desk, a chair, and a lamp.

A kitchen with wooden cabinets, a dining area with chairs, a refrigerator, and a microwave.

A swimming pool with a tiled floor, a pool ladder, and lounge chairs.

A hotel room with a sofa, a television, a desk with a chair, a lamp, a microwave, a framed picture, and a fireplace.

4. Econo Lodge Inn & Suites Yankton

Yankton

Kandy

$68 nightly

$76 total

Nov 15 - Nov 16

Total with taxes and fees

A hotel with a covered outdoor area, multiple windows, and a stone pillar.

A hotel lobby with a leather sofa, a patterned rug, a wooden cabinet, and a dining area with a table and chairs.

An indoor swimming pool with clear lane markings, lounge chairs, and umbrellas.

A hotel room with a bed, a desk with a chair, a television, a lamp, and a window with curtains.

5. Best Western Vermillion Inn

Vermillion

Sorat Noon

$96 nightly

$106 total

Nov 8 - Nov 9

Total with taxes and fees

A hotel pool area with a hot tub, lounge chairs, and a seating area with a view of the outdoors.

A hotel room with a large bed, two bedside tables, a nightstand, a lamp, and a wall-mounted artwork.

A reception desk with a blue and white geometric wall design, a Holiday Inn Express sign, and a security camera on the wall.

A spa pool with a safety sign, a metal ladder, and a control panel.

6. Holiday Inn Express & Suites Yankton by IHG

Yankton

Donna

$118 nightly

$130 total

Nov 9 - Nov 10

Total with taxes and fees

A hotel room with two beds, a desk, a chair, a window with curtains, a wall-mounted TV, and a large wall art piece.

A breakfast area with a coffee machine, a TV, and a clock on the wall.

A multi-story hotel with a covered entrance, stone accents, and a parking lot.

A reception area with a counter, a mounted sign, a wall-mounted picture, a door, and a potted plant.

7. Super 8 by Wyndham Yankton

Yankton

Jennifer

$86 nightly

$96 total

Nov 1 - Nov 2

Total with taxes and fees

A modern living room with a fireplace, seating area, and large windows.

A Fairfield by Marriott hotel with a modern design, featuring a prominent entrance and a stone facade.

A patio with outdoor seating, stone wall, and large windows.

A modern reception area with wooden paneling, a reception desk, and a refrigerated display case.

8. Fairfield Inn & Suites by Marriott Yankton

Yankton

Melissa

$114 nightly

$126 total

Nov 1 - Nov 2

Total with taxes and fees

A hotel room with a large bed, a separate bathroom with a bathtub, a desk with a television, and a view of trees through the window.

A hotel lobby with a reception desk, a dining area with chairs and a table, and a kitchen area in the background.

A living room with a stone fireplace, a flat-screen TV, and a patterned carpet.

A reception desk with a flat-screen TV, pendant lights, and a potted plant.

9. Cobblestone Inn & Suites - Hartington

Hartington

Ann

$100 nightly

$116 total

Oct 29 - Oct 30

Total with taxes and fees

A hotel corridor with carpeted floors, doors on both sides, and an exit sign on the ceiling.

A restaurant interior with a dining area, kitchen, and a sign indicating free Wi-Fi availability.

A hotel reception desk with a red wall, a stone accent wall, and a view of the street outside.

A hotel room with a bed, a desk, a chair, a television, and a microwave.

10. Red Roof Inn Vermillion - U of South Dakota

Vermillion

Samantha

$99 nightly

$110 total

Oct 25 - Oct 26

Total with taxes and fees

A hotel room with a large bed, a separate bathroom with a bathtub, a desk with a chair, and a window with blinds.

A hotel hallway with carpeted floors, white doors, and a ceiling light fixture.

A buffet with various food options, including omelets and other dishes, displayed in stainless steel containers.

A hotel hallway with carpeted flooring, a wall with a geometric design, and an elevator.

11. Holiday Inn Express Hotel & Suites Vermillion by IHG

Vermillion

Andy

$125 nightly

$138 total

Oct 28 - Oct 29

Total with taxes and fees

A reception area with a stone counter, a seating area with sofas, and a door labeled "Hotel Lobby".

A hotel room with two beds, a desk, a TV, and a lamp.

A Prairie Inn with a covered entrance and brick facade.

A spacious lobby with a large window, a reception desk, a sofa, and a coffee table.

12. Prairie Inn

Vermillion

Jim

$73 nightly

$79 total

Nov 24 - Nov 25

Total with taxes and fees

A motel with a row of rooms, a covered parking area, and a handicap-accessible parking space.

A hotel bathroom with a sink, mirror, and overhead lighting.

A laundry facility with washers and dryers, a bench, and a caution sign on the wall.

A hotel room with two beds, a TV, a desk, and a mirror.

13. Logan Creek Inn

Randolph

Randy

$85 nightly

$94 total

Oct 31 - Nov 1

Total with taxes and fees

A hotel room with two beds, a large framed waterfall painting, a lamp, and a window with curtains.

A small kitchenette with wooden cabinets, a microwave, and a shelf with various items.

A hotel sign with the name "Super 8" and a blank board below it.

A lobby with a reception desk, two armchairs, a coffee table, and potted plants.

14. Super 8 by Wyndham Beresford

Beresford

Sid

$68 nightly

$74 total

Oct 26 - Oct 27

Total with taxes and fees

A hotel room with two beds, a desk, a TV, a window with curtains, and a large wall painting.

A small kitchenette with a coffee machine, a toaster, and a microwave. There are two tables with chairs, a trash can, and a clock on the wall.

A hotel room with two beds, a large framed picture on the wall, two bedside lamps, and a nightstand with a lamp.

A modern bathroom with a sink, toilet, and shower.

15. Super 8 by Wyndham Yankton

Yankton

Hal

A wooden cabin interior with a spiral staircase, a dining area, a living room with a sofa, and a kitchen.

A wooden cabin with a loft bedroom, a staircase, and a view of the outside.

A building with a green roof, a sign reading 'Northwood Nest,' outdoor seating with wooden chairs, and a picnic table.

A log cabin interior with a fireplace, leather sofas, wooden tables, and a mounted television.

16. Family-friendly log cabin style house by Lewis & Clark Lake at DJ's Resort

Yankton

Linda

A grand staircase with wooden railings and a red flag, leading to a room with a patterned ceiling and string lights.

A bedroom with a bed, bedside table, lamp, and a window with blinds.

A bed with a metal headboard, two pillows, a bedside table with a lamp, and a window with curtains.

A bedroom with a bed, a bedside table, a lamp, and a mirror.

17. The Historic Argo Hotel

Crofton

John

$174 nightly

$194 total

Oct 25 - Oct 26

Total with taxes and fees

A hotel room with two beds, a desk, a chair, and a small sofa.

A living room with a brown leather sofa, a smaller brown leather armchair, a round coffee table, and a radiator.

A swimming pool with a tiled deck, a changing room, and a small seating area.

A compact kitchen with a dining area, equipped with a coffee machine, microwave, and refrigerator.

18. Econo Lodge Inn & Suites Yankton, SD

Yankton

A multi-story brick building with a prominent hotel sign, large windows, and a corner entrance.

A hotel sign with the name "HARTINGTON" against a dark sky.

A neatly arranged bedroom with a bed, two bedside lamps, patterned curtains, and a small rug.

A cozy restaurant interior with wooden beams, a Christmas tree, and a coffee bar.

19. Hotel Hartington

Hartington

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Top Wynot Hotel Reviews

Best Western Vermillion Inn

10/10 Excellent

"Convenient and clean. Close to activities."

Lewis and Clark Resort

10/10 Excellent

"My family and friends have stayed here decades, when paddle fishing. They are always freindly, the rooms and their aminities always work. It's very close to Gavins point and always have plenty of parking for a boat and your vehicles."

Fairfield Inn & Suites by Marriott Yankton

10/10 Excellent

"Staff was very nice and helpful. Room was clean and cozy"

Comfort Inn Yankton SD

10/10 Excellent

"Exactly what we paid for. Great value for the amount spent"

Super 8 by Wyndham Yankton

10/10 Excellent

"Very clean, they have done a lot of updates since the last time I stayed at the property"

Holiday Inn Express Hotel & Suites Vermillion by IHG

10/10 Excellent

"Great stay! Can’t complain."

Cozy Abode in Historic Yankton - Heart of the City

10/10 Excellent

"Very comfortable little converted storefront right in the heart of downtown. Cool little place, convenient parking. We enjoyed our stay."

The Historic Argo Hotel

8/10 Good

"Overall it was a good experience. Interesting history and decor."

Charming Lake House within Walking Distance from Lake

10/10 Excellent

"It was a great place to stay , it was nice the kids had their own area to hang out"

More cheap stays in Wynot

Econo Lodge Inn & Suites Yankton

2410 Broadway Ave Yankton SD

$68 nightly

$76 total

Nov 15 - Nov 16

Total with taxes and fees

Prairie Inn

916 N Dakota Street Vermillion SD

$73 nightly

$79 total

Nov 24 - Nov 25

Total with taxes and fees

Comfort Inn Yankton SD

611 W 23rd Street Yankton SD

$95 nightly

$105 total

Nov 15 - Nov 16

Total with taxes and fees

Best Western Vermillion Inn

701 W Cherry St Vermillion SD

$96 nightly

$106 total

Nov 8 - Nov 9

Total with taxes and fees

8.6/10 Excellent! (640 reviews)

Best Western Kelly Inn

1607 E Highway 50 Yankton SD

$106 nightly

$117 total

Nov 1 - Nov 2

Total with taxes and fees

Lewis and Clark Resort

43496 Shore Drive Yankton SD

$113 nightly

$120 total

Nov 1 - Nov 2

Total with taxes and fees

8.8/10 Excellent! (354 reviews)

Hotels in Wynot with star-rating

Frequently asked questions

When is the best time to go to Wynot?

The best time to go to Wynot is during the late spring, summer, and early fall months, specifically from May to October, when the weather is mild and conducive to outdoor activities.During these months, the weather is generally pleasant, with warmer temperatures and less precipitation, making it ideal for exploring the natural beauty around Wynot. This period allows visitors to comfortably enjoy activities like fishing, boating, and hiking in nearby state parks and recreation areas.For families, the summer months offer a great opportunity to enjoy local community events and spend time outdoors. The warmer weather means children can easily participate in activities like visiting local farms or enjoying picnics by the Missouri River.Couples looking for a relaxing getaway will appreciate the comfortable temperatures of late spring and early fall.

Can I cancel my hotel reservation on Expedia?

You can cancel your hotel reservation on Expedia, though it depends on the cancellation policy of your booking. Most bookings are refundable if canceled within 24-48 hours of the scheduled arrival. Be sure to check your booking confirmation for the exact cancellation policy. If free cancellation is available, you can cancel directly through your Expedia account by logging in, going to "My Trips", and selecting your reservation. To find flexible deals, filter your search by "Fully refundable property" for hotels in Wynot.

How much is the nightly rate at a Wynot hotel?

Prices for hotels in Wynot often vary, but you can find a great deal from $76 on Expedia. All sorts of factors affect price, such as the time of year or the days of the week you choose for your stay. Find the best deals by being flexible with your dates, and sort search results by "Price: low to high" for the cheapest rate.

Find hotels in Wynot, NE from $76

Go beyond your typical stay in Wynot

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for Wynot hotels

1. Lewis and Clark Resort

2. Comfort Inn Yankton SD

3. Best Western Kelly Inn

4. Econo Lodge Inn & Suites Yankton

5. Best Western Vermillion Inn

6. Holiday Inn Express & Suites Yankton by IHG

7. Super 8 by Wyndham Yankton

8. Fairfield Inn & Suites by Marriott Yankton

9. Cobblestone Inn & Suites - Hartington

10. Red Roof Inn Vermillion - U of South Dakota

11. Holiday Inn Express Hotel & Suites Vermillion by IHG

12. Prairie Inn

13. Logan Creek Inn

14. Super 8 by Wyndham Beresford

15. Super 8 by Wyndham Yankton

16. Family-friendly log cabin style house by Lewis & Clark Lake at DJ's Resort

17. The Historic Argo Hotel

18. Econo Lodge Inn & Suites Yankton, SD

19. Hotel Hartington

Top Wynot Hotel Reviews

Best Western Vermillion Inn

Lewis and Clark Resort

Fairfield Inn & Suites by Marriott Yankton

Comfort Inn Yankton SD

Super 8 by Wyndham Yankton

Holiday Inn Express Hotel & Suites Vermillion by IHG

Cozy Abode in Historic Yankton - Heart of the City

The Historic Argo Hotel

Charming Lake House within Walking Distance from Lake

More cheap stays in Wynot

Econo Lodge Inn & Suites Yankton

Prairie Inn

Comfort Inn Yankton SD

Best Western Vermillion Inn

Best Western Kelly Inn

Lewis and Clark Resort

Hotels in Wynot with star-rating

Frequently asked questions

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