$61 Cheap Flights from Manila (MNL) to El Nido (ENI)

View $61 flight on Wed, Jun 10, 2026Opens in a new window

Popular airlines from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)

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Cheap Flights from Manila to El Nido (MNL-ENI)

Prices were available within the past 7 days and start at $61 for one-way flights and $134 for round trip, for the period specified. Prices and availability are subject to change. Additional terms apply.

Cebu Pacific
Mon, Jun 8 - Wed, Jun 10
MNL
Manila
ENI
El Nido
$134 Roundtrip, found 5 days ago
$134
Roundtrip
found 5 days ago
Select Cebu Pacific flight, departing Mon, Jun 8 from Manila to El Nido, returning Wed, Jun 10, priced at $134 found 5 days ago
Cebu Pacific
Tue, Jun 2 - Thu, Jun 4
MNL
Manila
ENI
El Nido
$137 Roundtrip, found 8 hours ago
$137
Roundtrip
found 8 hours ago
Select Cebu Pacific flight, departing Tue, Jun 2 from Manila to El Nido, returning Thu, Jun 4, priced at $137 found 8 hours ago
Cebu Pacific
Tue, May 26 - Sun, May 31
MNL
Manila
ENI
El Nido
$138 Roundtrip, found 3 days ago
$138
Roundtrip
found 3 days ago
Select Cebu Pacific flight, departing Tue, May 26 from Manila to El Nido, returning Sun, May 31, priced at $138 found 3 days ago
Cebu Pacific
Mon, Sep 22 - Thu, Sep 25
MNL
Manila
ENI
El Nido
$140 Roundtrip, found 2 hours ago
$140
Roundtrip
found 2 hours ago
Select Cebu Pacific flight, departing Mon, Sep 22 from Manila to El Nido, returning Thu, Sep 25, priced at $140 found 2 hours ago
Cebu Pacific
Mon, Jun 15 - Fri, Jun 19
MNL
Manila
ENI
El Nido
$141 Roundtrip, found 6 hours ago
$141
Roundtrip
found 6 hours ago
Select Cebu Pacific flight, departing Mon, Jun 15 from Manila to El Nido, returning Fri, Jun 19, priced at $141 found 6 hours ago
Cebu Pacific
Thu, Sep 4 - Tue, Sep 9
MNL
Manila
ENI
El Nido
$142 Roundtrip, found 3 days ago
$142
Roundtrip
found 3 days ago
Select Cebu Pacific flight, departing Thu, Sep 4 from Manila to El Nido, returning Tue, Sep 9, priced at $142 found 3 days ago
Cebu Pacific
Tue, May 26 - Sun, May 31
MNL
Manila
ENI
El Nido
$146 Roundtrip, found 3 days ago
$146
Roundtrip
found 3 days ago
Select Cebu Pacific flight, departing Tue, May 26 from Manila to El Nido, returning Sun, May 31, priced at $146 found 3 days ago
Cebu Pacific
Mon, Sep 22 - Thu, Sep 25
MNL
Manila
ENI
El Nido
$148 Roundtrip, found 2 hours ago
$148
Roundtrip
found 2 hours ago
Select Cebu Pacific flight, departing Mon, Sep 22 from Manila to El Nido, returning Thu, Sep 25, priced at $148 found 2 hours ago
Cebu Pacific
Tue, Mar 10 - Tue, Mar 17
MNL
Manila
ENI
El Nido
$149 Roundtrip, found 5 days ago
$149
Roundtrip
found 5 days ago
Select Cebu Pacific flight, departing Tue, Mar 10 from Manila to El Nido, returning Tue, Mar 17, priced at $149 found 5 days ago
Cebu Pacific
Thu, Sep 4 - Tue, Sep 9
MNL
Manila
ENI
El Nido
$150 Roundtrip, found 3 days ago
$150
Roundtrip
found 3 days ago
Select Cebu Pacific flight, departing Thu, Sep 4 from Manila to El Nido, returning Tue, Sep 9, priced at $150 found 3 days ago

Alternative airports near El Nido

Prices were available within the past 7 days. Prices and availability are subject to change.

Select flight to El Nido ENI. Cheapest and Closest option available. Average driving time to city center is 8 minutes. Flights from $182
ENI
El Nido
CheapestClosest
Average driving time to city center8 min
Flights from $182
Flights from Manila (MNL) to El Nido (ENI)
Origin airport
Ninoy Aquino Intl.
Destination airport
El Nido
Airlines serving
Cebu Pacific
Roundtrip price
$133
Distance
252 mi
Average flight time
1 hour 30 mins

Manila to El Nido Flights

The cheapest times to fly from Manila to El Nido

On average, Thursday can be the cheapest time to fly, according to data from the Airlines Reporting Corporation (ARC), one of the world's biggest databases for global airline sales. The data reveals that you could save up to 16% by flying on a Thursday—the cheapest day to travel on average—instead of a Sunday—the most expensive. Some of the most affordable flights from Manila to El Nido are during the month of June. You can find some of the cheapest flights from Manila to El Nido with Expedia's search tool and vast selection of airlines.

 

The best time to book a flight from Manila to El Nido

Sunday is one of the best days to book for cheap flights from Manila to El Nido: Tickets reserved on a Sunday cost between 6% and 13% less than those reserved on a Friday, according to ARC data. The data also suggests booking early can also lead to cheaper airfares. You could save 24% by buying your tickets for domestic flights at least a month in advance and 10% by booking international flights 2 months in advance.

 

How to find cheap round-trip tickets from Manila to El Nido

Being flexible with your dates and using Expedia's Price Drop Protection and Price Tracking features are some of the best ways of finding a cheap ticket from Manila to El Nido in 2025. You can also book with separate airlines for your outbound and return journeys, from $61 one-way. Expedia also offers Price Drop Protection, so if the cost of your airfare goes down after booking, you'll receive a credit for the difference*. This is available for a small fee, and is free to One Key Gold and Platinum tier members.

 

Expedia's Price Tracking feature means you can stay on top of airfares without manually checking every day. It sends you automated price alerts for cheap Manila to El Nido flights and uses historical data to indicate when the best time to book is. Download Expedia's free app to activate this handy tool in a few easy taps.

 

You could also save big by booking one of Expedia's vacation packages. Bundling together your Manila to El Nido airfare with your accommodations and car rental is often cheaper than booking everything separately. There’s also One Key, Expedia's generous rewards program. Join for free and you could earn One Key cash on most bookings to save on future adventures.

 

*Terms apply.

 

Disclaimer: ARC The statistics are based on average round-trip ticket prices between January and August 2023. The percentages you see are averages.

 

Frequently asked questions

How much does a flight from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI) cost?
You can score cheap return tickets from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI) starting at $141. Book your seat and get ready for takeoff. This information is based on the cheapest price found on Expedia for this return journey departing within the next three months. This airfare is for a Cebu Pacific flight leaving MNL on August 17 2025 and touching down at ENI. The price was last updated on July 23 2025 and has not changed since.
What is the cheapest month to fly from MNL to ENI?
The cheapest flights from MNL to ENI are usually during off-peak season, when demand is lower. To save money, avoid flying during public holidays, school breaks and major local events.
Which airlines fly direct from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
Fly nonstop from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI) on an AirSWIFT flight.
What is the cheapest airline that flies from MNL to ENI?
At the moment, the cheapest carrier offering one-way flights from MNL to ENI is Cebu Pacific. You can jet off on this route from $69. This fare is based on the lowest price found on Expedia departing within the next three months. The flight takes off from MNL on September 4 2025. Prices were last updated on July 23 2025 and have not changed since.
How many flights per day from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
When taking off from Ninoy Aquino Intl. Airport (MNL), you'll have your pick from an average of 7 daily nonstop flights to El Nido (ENI).
What are the most popular departure times for flights from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
Flights between MNL and ENI are busiest at 6 AM. For a more relaxed atmosphere and possibly cheaper fares, choose a time outside the usual busy windows.
What day of the week has the most flights from MNL to ENI?
Travel on a Sunday if you're after the best choice of flights from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI).
What is the earliest flight from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
Hop on the earliest flight at around 5:15AM UTC+8, heading out of Ninoy Aquino Intl. Airport (MNL). You'll be flying for around 1h 30m, touching down at El Nido (ENI) at approximately 6:45AM UTC+8.
How long does it take to fly from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
Flights from MNL to ENI have an average travel time of 1 hour and 28 minutes. The total distance between these two airports is 250 mi.
What is the best time to fly from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
To avoid possible delays on the Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI) route, aim to fly before 3 PM. Departures after this time are 22% more likely to be canceled.**Most reliable time of the day and month to travel recommendation is based on January through August 2024 flight status data sourced from OAG's global flight data platform.
Is it cheaper to buy a plane ticket from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI) last-minute?
Booking your ticket from MNL to ENI right before your getaway is typically more expensive. But if you're flexible with your departure dates and times, you could bag a cheap last-minute fare.
Can I cancel or change the date of my flight from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
Typically, you can reschedule or cancel your MNL to ENI flight. However, additional fees may apply, especially if you made your booking more than 24 hours ago. Check your itinerary for the airline's policies and fees on flight changes, or if you need further details, go to our Customer Service portal.

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El Nido nearby Airports

San Vicente Airport

*Available to One Key members.