$62 Cheap Flights from Manila (MNL) to El Nido (ENI)

View $62 flight on Wed, Jul 1, 2026Opens in a new window

Popular airlines from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)

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Cheap Flights from Manila to El Nido (MNL-ENI)

Prices were available within the past 7 days and start at $62 for one-way flights and $140 for round trip, for the period specified. Prices and availability are subject to change. Additional terms apply.

Cebu Pacific
Tue, Jun 2 - Fri, Jun 5
MNL
Manila
ENI
El Nido
$140 Roundtrip, found 3 days ago
$140
Roundtrip
found 3 days ago
Select Cebu Pacific flight, departing Tue, Jun 2 from Manila to El Nido, returning Fri, Jun 5, priced at $140 found 3 days ago
Cebu Pacific
Mon, Sep 8 - Fri, Sep 12
MNL
Manila
ENI
El Nido
$143 Roundtrip, found 2 days ago
$143
Roundtrip
found 2 days ago
Select Cebu Pacific flight, departing Mon, Sep 8 from Manila to El Nido, returning Fri, Sep 12, priced at $143 found 2 days ago
Cebu Pacific
Mon, Jun 8 - Thu, Jun 11
MNL
Manila
ENI
El Nido
$143 Roundtrip, found 4 days ago
$143
Roundtrip
found 4 days ago
Select Cebu Pacific flight, departing Mon, Jun 8 from Manila to El Nido, returning Thu, Jun 11, priced at $143 found 4 days ago
Cebu Pacific
Mon, Sep 15 - Thu, Sep 18
MNL
Manila
ENI
El Nido
$144 Roundtrip, found 3 days ago
$144
Roundtrip
found 3 days ago
Select Cebu Pacific flight, departing Mon, Sep 15 from Manila to El Nido, returning Thu, Sep 18, priced at $144 found 3 days ago
Cebu Pacific
Mon, Sep 8 - Fri, Sep 12
MNL
Manila
ENI
El Nido
$151 Roundtrip, found 2 days ago
$151
Roundtrip
found 2 days ago
Select Cebu Pacific flight, departing Mon, Sep 8 from Manila to El Nido, returning Fri, Sep 12, priced at $151 found 2 days ago
Cebu Pacific
Tue, Sep 2 - Fri, Sep 5
MNL
Manila
ENI
El Nido
$152 Roundtrip, found 3 days ago
$152
Roundtrip
found 3 days ago
Select Cebu Pacific flight, departing Tue, Sep 2 from Manila to El Nido, returning Fri, Sep 5, priced at $152 found 3 days ago
Cebu Pacific
Tue, Jun 2 - Fri, Jun 5
MNL
Manila
ENI
El Nido
$156 Roundtrip, found 3 days ago
$156
Roundtrip
found 3 days ago
Select Cebu Pacific flight, departing Tue, Jun 2 from Manila to El Nido, returning Fri, Jun 5, priced at $156 found 3 days ago
Cebu Pacific
Sat, Jun 6 - Tue, Jun 9
MNL
Manila
ENI
El Nido
$157 Roundtrip, found 2 days ago
$157
Roundtrip
found 2 days ago
Select Cebu Pacific flight, departing Sat, Jun 6 from Manila to El Nido, returning Tue, Jun 9, priced at $157 found 2 days ago
Cebu Pacific
Mon, Sep 1 - Tue, Sep 9
MNL
Manila
ENI
El Nido
$159 Roundtrip, found 5 days ago
$159
Roundtrip
found 5 days ago
Select Cebu Pacific flight, departing Mon, Sep 1 from Manila to El Nido, returning Tue, Sep 9, priced at $159 found 5 days ago
Cebu Pacific
Sat, Sep 6 - Tue, Sep 9
MNL
Manila
ENI
El Nido
$160 Roundtrip, found 6 days ago
$160
Roundtrip
found 6 days ago
Select Cebu Pacific flight, departing Sat, Sep 6 from Manila to El Nido, returning Tue, Sep 9, priced at $160 found 6 days ago

Alternative airports near El Nido

Prices were available within the past 7 days. Prices and availability are subject to change.

Select flight to El Nido ENI. Cheapest and Closest option available. Average driving time to city center is 8 minutes. Flights from $144
ENI
El Nido
CheapestClosest
Average driving time to city center8 min
Flights from $144
Flights from Manila (MNL) to El Nido (ENI)
Origin airport
Ninoy Aquino Intl.
Destination airport
El Nido
Roundtrip price
$140
Distance
252 mi
Average flight time
1 hour 30 mins

Manila to El Nido Flights

The cheapest times to fly from Manila to El Nido

On average, Thursday can be the cheapest time to fly, according to data from the Airlines Reporting Corporation (ARC), one of the world's biggest databases for global airline sales. The data reveals that you could save up to 16% by flying on a Thursday—the cheapest day to travel on average—instead of a Sunday—the most expensive. Some of the most affordable flights from Manila to El Nido are during the month of June. You can find some of the cheapest flights from Manila to El Nido with Expedia's search tool and vast selection of airlines.

 

The best time to book a flight from Manila to El Nido

Sunday is one of the best days to book for cheap flights from Manila to El Nido: Tickets reserved on a Sunday cost between 6% and 13% less than those reserved on a Friday, according to ARC data. The data also suggests booking early can also lead to cheaper airfares. You could save 24% by buying your tickets for domestic flights at least a month in advance and 10% by booking international flights 2 months in advance.

 

How to find cheap round-trip tickets from Manila to El Nido

Being flexible with your dates and using Expedia's Price Drop Protection and Price Tracking features are some of the best ways of finding a cheap ticket from Manila to El Nido in 2025. You can also book with separate airlines for your outbound and return journeys, from $62 one-way. Expedia also offers Price Drop Protection, so if the cost of your airfare goes down after booking, you'll receive a credit for the difference*. This is available for a small fee, and is free to One Key Gold and Platinum tier members.

 

Expedia's Price Tracking feature means you can stay on top of airfares without manually checking every day. It sends you automated price alerts for cheap Manila to El Nido flights and uses historical data to indicate when the best time to book is. Download Expedia's free app to activate this handy tool in a few easy taps.

 

You could also save big by booking one of Expedia's vacation packages. Bundling together your Manila to El Nido airfare with your accommodations and car rental is often cheaper than booking everything separately. There’s also One Key, Expedia's generous rewards program. Join for free and you could earn One Key cash on most bookings to save on future adventures.

 

*Terms apply.

 

Disclaimer: ARC The statistics are based on average round-trip ticket prices between January and August 2023. The percentages you see are averages.

 

Frequently asked questions

How much does a flight from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI) cost?
Lock in a cheap one-way flight from $62 or cheap return flight from $140 from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI) with Expedia. Enter your travel dates and sort by "Price (lowest to highest)" to see our cheapest flight offers on this route.
What is the cheapest month to fly from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
June is the least expensive month to fly from MNL to ENI. Timing your trip outside of the busy season is often the key to scoring lower fares.
Which airlines fly direct from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
Fly nonstop from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI) on an AirSWIFT flight.
How many flights per day from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
When taking off from Ninoy Aquino Intl. Airport (MNL), you'll have your pick from an average of 7 daily nonstop flights to El Nido (ENI).
What are the most popular departure times for flights from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
Flights between MNL and ENI are busiest at 6 AM. For a more relaxed atmosphere and possibly cheaper fares, choose a time outside the usual busy windows.
What day of the week has the most flights from MNL to ENI?
Travel on a Sunday if you're after the best choice of flights from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI).
What is the earliest flight from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
Hop on the earliest flight at around 5:15AM UTC+8, heading out of Ninoy Aquino Intl. Airport (MNL). You'll be flying for around 1h 30m, touching down at El Nido (ENI) at approximately 6:45AM UTC+8.
How long does it take to fly from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
Flights from MNL to ENI have an average travel time of 1 hour and 28 minutes. The total distance between these two airports is 250 mi.
What is the best time to fly from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
To avoid possible delays on the Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI) route, aim to fly before 3 PM. Departures after this time are 22% more likely to be canceled.**Most reliable time of the day and month to travel recommendation is based on January through August 2024 flight status data sourced from OAG's global flight data platform.
Is it cheaper to buy a plane ticket from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI) last-minute?
Booking your ticket from MNL to ENI right before your getaway is typically more expensive. But if you're flexible with your departure dates and times, you could bag a cheap last-minute fare.
Can I cancel or change the date of my flight from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)?
Typically, you can reschedule or cancel your MNL to ENI flight. However, additional fees may apply, especially if you made your booking more than 24 hours ago. Check your itinerary for the airline's policies and fees on flight changes, or if you need further details, go to our Customer Service portal.

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*Available to One Key members.