Boutique Hotels in Kyoto Prefecture from $76
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Check availability on Kyoto Prefecture Boutique Hotels
Pick from 19 Kyoto Prefecture Boutique Hotels with updated room rates, reviews, and availability. Most hotels are fully refundable.
The Screen
Downtown Kyoto
9.4 out of 10, Exceptional, (326)
"Cool convenient room, friendly staff, great location "
Tomek
$185 nightly
The price is $203
Jan 5 - Jan 6, 2026
Hotel Kanra Kyoto
Shimogyo Ward
9.6 out of 10, Exceptional, (1000)
"Beautiful hotel and amazing staff "
Veronica Esther
$236 nightly
The price is $260
Dec 17 - Dec 18
Gagakuan
Shimogyo Ward
10.0 out of 10, Exceptional, (28)
"Spent four days at Gagakuan, satisfied, although unexpected cold weather even in spring. Late sakura blooming, still managed to view some. Did not follow tour, rather venture on our own. Visited places of interest but unable to cover all due to insufficient time, maybe next time would to come again. "
Tony
Noku Kyoto
Downtown Kyoto
9.4 out of 10, Exceptional, (1000)
"It was very clean, friendly and very efficient staff and great buffet. "
Glenn
$74 nightly
The price is $82
Jan 5 - Jan 6, 2026
Sakura Terrace The Gallery
Minami Ward
9.2 out of 10, Wonderful, (1077)
"Very pleased with our stay."
Aisha
$86 nightly
The price is $95
Dec 10 - Dec 11
Villa Sanjo Muromachi Kyoto
Downtown Kyoto
9.6 out of 10, Exceptional, (285)
"Very lovely boutique hotel. Beds a little firmer than expected but wonderful hotel overall! "
Alina
$144 nightly
The price is $159
Dec 9 - Dec 10
Mitsui Garden Hotel Kyoto Shinmachi Bettei
Downtown Kyoto
9.2 out of 10, Wonderful, (1000)
"Excellent stay "
Bryan
$92 nightly
The price is $102
Dec 18 - Dec 19
Aoi Hotel Kyoto
Shimogyo Ward
9.8 out of 10, Exceptional, (131)
"Beautiful room and really nice staff."
Julie
$298 nightly
The price is $329
Dec 11 - Dec 12
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top Kyoto Prefecture Hotel Reviews
THE BLOSSOM KYOTO
10/10 Excellent
