Top 10 Hotels in San Isidro (from $16) 2026 - Competitive Prices

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Our top choices for San Isidro hotels

A bar area with a long counter, potted plants, and a large mirror reflecting the ceiling.

A staircase with ornate metal railings and a central light fixture.

A multi-story residential building with a central staircase, balconies, and a front garden with various plants.

An outdoor covered area with a wooden floor, metal railings, and a canopy structure.

1. Fragoch Tourist Inn

Naval

Clifford

$22 nightly

$25 total

Oct 12 - Oct 13

Total with taxes and fees

A bed with a towel arranged in the shape of two swans.

A hallway with two framed paintings, an exit sign, and a light fixture.

A reception area with a wooden counter, a clock, framed pictures on the wall, and a sign that reads "D'Mei Residence Tan Naval".

A view of a coastal town with buildings, a clear sky, and a distant view of the sea.

2. D'Mei Residence Inn - Naval

Naval

MUBARAK

$26 nightly

$26 total

Nov 5 - Nov 6

Total with taxes and fees

A multi-story building with balconies, outdoor seating, and a staircase.

A swimming pool with a curved edge, surrounded by a well-maintained lawn and a building with a yellow facade.

A hotel room with two beds, a wooden wardrobe, a desk, and a mirror.

A spacious living area with a brown leather sofa, a dining table with chairs, and a kitchen area in the background.

3. Marvin's Seaside Inn

Naval

Mauro

$39 nightly

$44 total

Oct 17 - Oct 18

Total with taxes and fees

A long, narrow hallway with tiled floors and wooden walls, leading to an exit door at the end.

A waiting area with two leather chairs, a small table with a flower, and a television on a shelf.

A reception area with a desk, chairs, a small table with flowers, and a mirror.

4. GV Hotel Naval

Naval

Jeniza

$20 nightly

$22 total

Nov 5 - Nov 6

Total with taxes and fees

A hotel room with two beds, each with white linens and a rolled towel on the bed. There are two nightstands, one on each side of the beds. The room has a beige wall and a black headboard.

A modern hotel room with a large bed, two bedside tables, a wardrobe, and a small kitchenette area.

A multi-story building with a green and yellow facade, featuring a prominent 'WAD MALL' sign at the entrance.

5. Hotel Benjamin Naval

Naval

Billy

$43 nightly

$43 total

Oct 15 - Oct 16

Total with taxes and fees

A poolside area with a hammock, lounge chairs, and a table with drinks.

A two-story building with a balcony, surrounded by lush greenery and a sandy ground.

A restaurant interior with a wooden ceiling, a neon sign reading "The Shark's Tale", a blue bench, and a table with chairs.

A bedroom with a bed, bedside table, and a desk with a chair.

6. The Sharks Tail Dive Resort

Daanbantayan

Manaf

$30 nightly

$34 total

Oct 25 - Oct 26

Total with taxes and fees

A two-story building with a symmetrical facade, featuring a central entrance with a wooden door, flanked by windows and balconies.

A hotel room with a bed, a balcony with a chair, and a painting of a sailboat on the wall.

A hotel room with a large bed, two bedside tables with lamps, a wall-mounted air conditioner, and a painting above the bed.

A small, rustic kitchenette with a bamboo counter, a refrigerator, and shelves stocked with snacks and beverages.

7. Malapascua Starlight Resort

Daanbantayan

Jonas

$31 nightly

$34 total

Oct 9 - Oct 10

Total with taxes and fees

A pool area with a view of the ocean, a green deck with seating, and palm trees.

A hotel lobby with a reception desk, a chandelier, an air conditioning unit, a television, and a large mural of the Eiffel Tower.

A spacious room with a large window, a ceiling fan, and a television mounted on the wall.

A view of a coastal area with a clear sky, a body of water, and a distant shoreline.

8. Bunga Prime Resort

Cabucgayan

Mubarark

$31 nightly

$31 total

Oct 7 - Oct 8

Total with taxes and fees

A beach with clear turquoise water, palm trees, and a boat on the sand.

A restaurant with wooden decor, a bar area, and tables set for dining.

A two-story building with a white exterior and a thatched roof. The front features a sign for 'Exotic Island Dive Resort' and a glass display case.

A beachfront hotel with palm trees, lounge chairs, and a bar area.

9. Malapascua Exotic Island Dive and Beach Resort

Daanbantayan

Cristina

$40 nightly

$45 total

Oct 9 - Oct 10

Total with taxes and fees

A wooden deck with a stone wall, a cushioned seating area, and a view of the sea with a boat.

A thatched-roof house with a wooden balcony, stone walls, and a small garden.

A beachfront resort with thatched-roof huts, a stone wall, and lush greenery.

A pool area with lounge chairs and a wooden deck.

10. Tepanee Beach Resort

Daanbantayan

Nick

$61 nightly

$70 total

Nov 2 - Nov 3

Total with taxes and fees

A beach with palm trees, a hammock, and a view of the ocean.

A resort with a swimming pool, thatched-roof structures, and tropical vegetation.

A two-story building with a red-tiled roof, balconies, and a garden area with palm trees.

A resort with multiple buildings, including a two-story structure with balconies and a smaller building with a thatched roof.

11. Slam's Garden Dive Resort

Daanbantayan

Rosanna Labajo

$21 nightly

$24 total

Oct 9 - Oct 10

Total with taxes and fees

A beach with clear turquoise water, a rocky cliff, and a sandy shore.

A person relaxing by a table with a view of the sea.

A bar area with a wooden counter, bottles of alcohol, and wicker chairs.

A courtyard with a stone pathway, a wooden pergola, and lush greenery.

12. Avila's Horizon Dive Resort

Daanbantayan

Ciprian

$26 nightly

$29 total

Oct 13 - Oct 14

Total with taxes and fees

A beach with clear turquoise water, a sandy shore, and a few people.

A building with a thatched roof, white walls, and a covered outdoor seating area.

A beachside area with thatched-roof structures, palm trees, and lounge chairs.

A hotel room with a bed, a desk, and a bathroom visible through an archway.

13. Little Mermaid Dive Resort

Daanbantayan

Dorthe

$43 nightly

$48 total

Oct 9 - Oct 10

Total with taxes and fees

Two people sitting by a pool surrounded by lush greenery.

A bedroom with a bed, bedside tables, and a hanging chair.

A spacious living area with high ceilings, exposed beams, and a central coffee table.

A large Buddha mural in a lobby with a woman sitting on a bench. There are potted plants and a hanging light fixture.

14. Buena Vida Resort and Spa

Daanbantayan

Stephanie

$74 nightly

$83 total

Oct 16 - Oct 17

Total with taxes and fees

An aerial view of a tropical island with a beach, clear turquoise waters, and a small boat.

A beachside hotel with a balcony, a staircase leading to the upper floor, and a view of the sea.

A double bed with a white bedspread, two pillows, a rolled towel, and a fan.

A beachside bar with a thatched roof, wooden seating, and a railing.

15. Blue Corals Beach Resort

Daanbantayan

Graham

$24 nightly

$27 total

Oct 8 - Oct 9

Total with taxes and fees

An outdoor seating area with tables and chairs, surrounded by lush greenery and a covered structure.

A reception area with a counter, wicker chairs, a ceiling fan, and a sign for Moonlight Resort.

A reception area with a 'Moonlight Resort' sign, potted plants, and a wicker chair.

A neatly made bed with white linens, two decorative pillows, a tray with a drink, a bowl of nuts, and a menu on the bed.

16. Moonlight Resort

Daanbantayan

Louise

$24 nightly

$24 total

Oct 11 - Oct 12

Total with taxes and fees

A beach view with palm trees, a wooden fence, and a clear blue sky.

A swimming pool with multiple lanes, a lounge area with chairs, and a building with a green roof in the background.

A hotel room with a large bed, a wooden headboard, a nightstand, and a view of the beach.

A two-story building with a balcony and a covered outdoor seating area.

17. Malapascua Legend Water Sports & Resort

Daanbantayan

Andrew Curtis

$55 nightly

$63 total

Nov 2 - Nov 3

Total with taxes and fees

A wooden deck with a TV screen, a wooden table, and a decorative plant.

A room with a bed, a fan, a window, and a view of the outside.

A hallway with a mural of palm trees and a beach scene.

A room with a beach mural, a door labeled "Room 1", and a sign stating "STRESS NOT ALLOWED".

18. Villa-Atlas Guest House

Daanbantayan

$16 nightly

$16 total

Oct 23 - Oct 24

Total with taxes and fees

A bedroom with a bed, curtains, a dresser, and a blue rug.

A bathroom with a checkered tile backsplash, a white sink, a mirror, and a shower.

A building with a sign reading "MINIMART TOURIST INN" and "MINIMART SHOP" on the upper level.

A building with a sign reading "MINIMART TOURIST INN & DIVE SHOP".

19. Dos Marias Tourist Inn

Daanbantayan

$21 nightly

$24 total

Oct 8 - Oct 9

Total with taxes and fees

A rustic bar area with wooden walls, a shelf of bottles, and chalkboards listing drinks and prices.

A bunk bed with a checkered bedspread, a white wardrobe with shelves, and a mirror.

A rustic, wooden-themed bar area with a chalkboard menu, a fan, and stools.

A beach-themed restaurant with a wooden floor, a covered outdoor seating area, and a mural of a surfer.

20. Malapascua Budget Inn

Daanbantayan

Anonymous traveler

$27 nightly

$27 total

Oct 14 - Oct 15

Total with taxes and fees

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Top San Isidro Hotel Reviews

Malapascua Exotic Island Dive and Beach Resort

10/10 Excellent

"This place was great clean nice rooms great food and staff 9/10"

Ocean Vida Beach and Dive Resort

10/10 Excellent

"We had a great week in this resort. If we ever go back to Malapascua we would stay here again"

Marvin's Seaside Inn

10/10 Excellent

"Judging on the photos when booking, some of the rooms may be a bit older and some are freshly remodeled. We opted for one of the newly refreshed ones and it was fantastic. Understandably a little more expensive than the older ones but totally worth it. Both room and bathroom up to European standards! Would book again if ever in the area"

Blanco Beach Resort

10/10 Excellent

"We had a fantastic stay!"

Buena Vida Resort and Spa

10/10 Excellent

"Very relaxing and nice resort. Very relaxing massage at the resort. The staff was friendly and helpful."

D'Mei Residence Inn - Naval

8/10 Good

"It was good stay"

Evolution Dive and Beach Resort

10/10 Excellent

"All good things about Evolution Dive Resort, from organising our accommodation, to the dives, dive guides, the reception staff & the dive shop. 100% returning to Malapascua & Evolution Dive Resort. Anybody reading this, dont compromise your holiday, stay here."

RLJ Beach House

8/10 Good

"We used the equipped kitchen for many meals. Everything was clean and functional including the laundry. We stayed over a week and want to return on my next trip."

Malapascua Starlight Resort

10/10 Excellent

"Staff was friendly and helpful and room was clean. Location was next to market with restaurants and fresh fish at night. Money changer (red sign) was a five minute walk with too rate exchange.Easy walk to Sunset beach by Port. Easy walk to most everything. Dive shops everywhere."

More cheap stays in San Isidro

Guanna's Place Room and Resto Bar

Malapascua Island Daanbantayan Central Visayas

$19 nightly

$22 total

Oct 31 - Nov 1

Total with taxes and fees

Dos Marias Tourist Inn

Indonacion, Malapascua Island Daanbantayan Central Visayas

$21 nightly

$24 total

Oct 8 - Oct 9

Total with taxes and fees

D'Mei Residence Inn - Naval

213 P. Inocentes St Naval Biliran

$26 nightly

$26 total

Nov 5 - Nov 6

Total with taxes and fees

8.8/10 Excellent! (37 reviews)

Avila's Horizon Dive Resort

Sitio Langub, Logon Daanbantayan Cebu

$26 nightly

$29 total

Oct 13 - Oct 14

Total with taxes and fees

8.4/10 Very Good! (21 reviews)

Malapascua Starlight Resort

Daanbantayan Daanbantayan

$31 nightly

$34 total

Oct 9 - Oct 10

Total with taxes and fees

Marvin's Seaside Inn

567 Atipolo Naval

$39 nightly

$44 total

Oct 17 - Oct 18

Total with taxes and fees

7.8/10 Good! (46 reviews)

Frequently asked questions

What is the best area to stay in San Isidro?

For most visitors, the best area to stay in San Isidro is the town proper, particularly near the municipal hall and the public market.This central area offers convenient access to local amenities and transportation. You'll find a concentration of eateries, local shops, and the main pier here, which serves as a gateway to nearby islands and coastal towns. The area around the municipal hall is a focal point for community activities and provides a good sense of local life.Travelers looking for convenience and a taste of local culture will find this area ideal.

When is the best time to go to San Isidro?

The best time to visit San Isidro, Eastern Visayas, is during the dry season, which typically runs from March to May.This period offers pleasant weather with less rainfall and lower humidity, making it ideal for outdoor activities and exploring the natural beauty of the region. Travelers will find it comfortable for beach visits and island hopping. This is a great time for couples looking for sunny days for relaxation and adventure.Another good time to visit is from December to February. While there might be occasional rain showers, the temperatures are generally cooler and more comfortable than the peak dry season.

Can I cancel my hotel reservation on Expedia?

You can cancel your hotel reservation on Expedia, though it depends on the cancellation policy of your booking. Most bookings are refundable if canceled within 24-48 hours of the scheduled arrival. Be sure to check your booking confirmation for the exact cancellation policy. If free cancellation is available, you can cancel directly through your Expedia account by logging in, going to "My Trips", and selecting your reservation. To find flexible deals, filter your search by "Fully refundable property" for hotels in San Isidro.

How much is the nightly rate at a San Isidro hotel?

Prices for hotels in San Isidro often vary, but you can find a great deal from $16 on Expedia. All sorts of factors affect price, such as the time of year or the days of the week you choose for your stay. Find the best deals by being flexible with your dates, and sort search results by "Price: low to high" for the cheapest rate.

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Book Hotels in San Isidro on Expedia.com.ph

Find hotels in San Isidro from $16

Upfront pricing

Treat yourself

Be picky

Go beyond your typical stay in San Isidro

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for San Isidro hotels

1. Fragoch Tourist Inn

2. D'Mei Residence Inn - Naval

3. Marvin's Seaside Inn

4. GV Hotel Naval

5. Hotel Benjamin Naval

6. The Sharks Tail Dive Resort

7. Malapascua Starlight Resort

8. Bunga Prime Resort

9. Malapascua Exotic Island Dive and Beach Resort

10. Tepanee Beach Resort

11. Slam's Garden Dive Resort

12. Avila's Horizon Dive Resort

13. Little Mermaid Dive Resort

14. Buena Vida Resort and Spa

15. Blue Corals Beach Resort

16. Moonlight Resort

17. Malapascua Legend Water Sports & Resort

18. Villa-Atlas Guest House

19. Dos Marias Tourist Inn

20. Malapascua Budget Inn

Top San Isidro Hotel Reviews

Malapascua Exotic Island Dive and Beach Resort

Ocean Vida Beach and Dive Resort

Marvin's Seaside Inn

Blanco Beach Resort

Buena Vida Resort and Spa

D'Mei Residence Inn - Naval

Evolution Dive and Beach Resort

RLJ Beach House

Malapascua Starlight Resort

More cheap stays in San Isidro

Guanna's Place Room and Resto Bar

Dos Marias Tourist Inn

D'Mei Residence Inn - Naval

Avila's Horizon Dive Resort

Malapascua Starlight Resort

Marvin's Seaside Inn

Frequently asked questions

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