
Find hotels in Ayios Thomas from $50
- Upfront pricingOur total price for your stay includes taxes and fees
- Treat yourselfSave 10% or more on over 100,000 hotels worldwide with Member PricesLearn about One Key
- Be pickySearch almost a million properties worldwide
Go beyond your typical stay in Ayios Thomas
Pet friendly
Villa
Apartment
Apart hotel
Condo
Resort
Family friendly
Waterpark
Check prices for these dates
Tonight
Aug 9 - Aug 10Tomorrow
Aug 10 - Aug 11Next weekend
Aug 14 - Aug 16In two weeks
Aug 21 - Aug 23Our top choices for Ayios Thomas hotels




1. Traditional Cretan Houses
Traditional Cretan HousesHeraklion
Callum
$55 nightly
$63 total
Aug 17 - Aug 18
Total with taxes and fees




2. Aetovigla Traditional Guest Houses
Aetovigla Traditional Guest HousesMalevizi
Monica
$113 nightly
$131 total
Sep 2 - Sep 3
Total with taxes and fees




3. Idi Hotel
Idi HotelFaistos
Erin
$81 nightly
$95 total
Sep 1 - Sep 2
Total with taxes and fees




4. Sofia Hotel
Sofia HotelNea Alikarnassos
Jonel
$81 nightly
$98 total
Sep 1 - Sep 2
Total with taxes and fees




5. Manili Suites & Villas, an SLH Hotel
Manili Suites & Villas, an SLH HotelArchanes-Asterousia
David
$147 nightly
$176 total
Aug 23 - Aug 24
Total with taxes and fees




6. Marble Luxury Suites
Marble Luxury SuitesHeraklion
Mike
$98 nightly
$120 total
Sep 6 - Sep 7
Total with taxes and fees




7. Chapter 02 Gallery Suites
Chapter 02 Gallery SuitesHeraklion
Kimberly
$108 nightly
$125 total
Sep 2 - Sep 3
Total with taxes and fees




8. Stay 365 Heraklion Apart Hotel
Stay 365 Heraklion Apart HotelHeraklion
Luis
$86 nightly
$101 total
Aug 13 - Aug 14
Total with taxes and fees




9. Karteros Hotel
Karteros HotelHersonissos
Pantelis
$69 nightly
$85 total
Aug 30 - Aug 31
Total with taxes and fees




10. Eliathos Hillside Retreat
Eliathos Hillside RetreatArchanes-Asterousia
louise
$145 nightly
$167 total
Sep 3 - Sep 4
Total with taxes and fees




11. Asterion Hotel
Asterion HotelNea Alikarnassos
John
$91 nightly
$109 total
Sep 9 - Sep 10
Total with taxes and fees




12. Marvel Deluxe Rooms
Marvel Deluxe RoomsNea Alikarnassos
Michael
$90 nightly
$105 total
Sep 3 - Sep 4
Total with taxes and fees




13. Artree Suites
Artree SuitesHeraklion
Francis
$100 nightly
$116 total
Aug 11 - Aug 12
Total with taxes and fees




14. GDM Megaron Historical Monument Hotel
GDM Megaron Historical Monument HotelHeraklion
Giordano
$154 nightly
$175 total
Aug 17 - Aug 18
Total with taxes and fees




15. Anesea City
Anesea CityNea Alikarnassos
Matthew
$118 nightly
$146 total
Aug 24 - Aug 25
Total with taxes and fees




16. Galaxy Hotel Iraklio
Galaxy Hotel IraklioHeraklion
Andre
$125 nightly
$160 total
Aug 31 - Sep 1
Total with taxes and fees




17. City Lion by Semavi
City Lion by SemaviHeraklion
Gary
$123 nightly
$142 total
Sep 5 - Sep 6
Total with taxes and fees




18. Pavo Art Hotel
Pavo Art HotelHeraklion
Paul
$88 nightly
$102 total
Aug 11 - Aug 12
Total with taxes and fees




19. Kronos Hotel
Kronos HotelHeraklion
Tayfun
$86 nightly
$100 total
Sep 2 - Sep 3
Total with taxes and fees




20. Atrion Hotel
Atrion HotelHeraklion
Evghenia
$85 nightly
$103 total
Aug 21 - Aug 22
Total with taxes and fees
Top Ayios Thomas Hotel Reviews
Peninsula Resort & Spa - All Inclusive
8/10 Good
"Food was varied and plenty at every meal. The staff is kind and goes above and beyond to make sure you have everything you need.the views and the balcony are spectacular. The only negatives: beaches are tiny and very rocky. Sea is crystal clear and refreshing but you have to walk down hills and mountains to reach the beaches and it can be challenging for small children or older people. Beaches are public and you have to pay 10 euros for a bed. In the hotel, Ac is perfect. However, you cannot put toilet paper in the toilet which was super inconvenient and unsanitary. The rooms are carved into the mountain which creates a romantic atmosphere but after a week up and down stairs and narrow passages, I do not mind leaving. Overall, it was a nice stay but would not come back."
GDM Megaron Historical Monument Hotel
10/10 Excellent
"The staff was super friendly across the board, very welcoming and willing to help. The room was very clean, put together, and had a great view of the town and harbor. We loved the breakfast well worth the extra €20. Overall a great stay and very close to everything we were hoping to see."
Capsis Astoria Heraklion Hotel
10/10 Excellent
"Lovely hotel with a beautiful swimming pool on the roof. Located right in the heart of Heraklion. Shops, restaurants around the corner and the museum practically next door. Buffet breakfast was exceptional. Will definitely stay again."
Atrion Hotel
8/10 Good
"Voyage en famille, août 2026. L’hôtel est bien situé dans la ville. Nous avons beaucoup aimé le petit déjeuner. Les matelas étaient peu confortables et la climatisation dans la chambre était bruyante. Je recommande pour une nuit."
Lato Boutique Hotel
10/10 Excellent
"Liked everything. All the staff were very friendly and helpful and the view from our balcony was superb."
Galaxy Hotel Iraklio
10/10 Excellent
"All good"
Sofia Hotel
8/10 Good
"The property was nice and clean. The staff was friendly.. The only issue we had was that our air-conditioning unit was not working well. The room was warm and stuffy. Staff told us to open our windows for a breeze..."
RoccaMare Heraklion - Handwritten Collection
10/10 Excellent
"Great modern place and ex relent service from the friendly staff !!"
Olive Green Hotel
10/10 Excellent
"Half board was well worth it. Good food. Lean rooms and very friendly staff. They even packed us a breakfast since we checked out before breakfast started."
More cheap stays in Ayios Thomas

Matala Dimitris Villa
Matala Faistos Crete
$42 nightly
$50 total
Aug 23 - Aug 24
Total with taxes and fees
7.6/10 Good! (183 reviews)

Mirabello Hotel
20 Theotokopoulou St Heraklion Crete Island
$67 nightly
$79 total
Aug 13 - Aug 14
Total with taxes and fees
8.6/10 Excellent! (395 reviews)

El Greco Hotel
4, Street 1821 Heraklion Crete Island
$71 nightly
$83 total
Sep 8 - Sep 9
Total with taxes and fees

Kronos Hotel
2, Sof. Venizelou Str. and M. Agarathou Heraklion Crete Island
$86 nightly
$100 total
Sep 2 - Sep 3
Total with taxes and fees
8.8/10 Excellent! (634 reviews)

Thalia Bloom Villa Apartments
Marikas Kapsi Malevizi Heraklion
$113 nightly
$130 total
Sep 5 - Sep 6
Total with taxes and fees
9.4/10 Exceptional! (30 reviews)

Pela Mare Hotel
Agia Pelagia Malevizi Crete Island
$148 nightly
$171 total
Sep 6 - Sep 7
Total with taxes and fees
9.4/10 Exceptional! (247 reviews)
Hotels in Ayios Thomas with star-rating

5 Star Hotels
23 properties
Frequently asked questions
Explore a world of travel with Expedia
- Hotels with Connecting Rooms in Heraklion
- Gortyna Hotels
- Family Hotels in Heraklion
- Lodges in Heraklion
- Hotels with an Indoor Pool in Heraklion
- Hotels with an Outdoor Pool in Heraklion
- Historic Hotels in Heraklion
- Winery Hotels in Heraklion
- Farmstay in Heraklion
- Petrokefalo Hotels
- Golf Hotels in Heraklion
- Hotels with Hot Tubs in Heraklion
- Zaros Hotels
- Condo Rentals in Heraklion
- Cheap Hotels in Heraklion
- Hotels with Tennis Courts in Heraklion
- Hotels near Museum of Messara
- Waterpark Hotels in Heraklion
- Rv Parks in Heraklion
- Hotels with Free Parking in Gortyna
- Oceanfront Hotels in Heraklion
- Resorts & Hotels with Spas in Heraklion
- Pet-Friendly Hotels in Heraklion
- Apartments in Heraklion
- Gay friendly Hotels in Heraklion
- Honeymoon Resorts & in Heraklion
- Asimi Hotels
- Heraklion Hotels
- Áno Kalésia Hotels
- Luxury Hotels in Heraklion
- Guest Houses in Heraklion
- Cottages in Heraklion
- Hotels with Free Parking in Heraklion
- Hotels with Free Airport Shuttle in Heraklion
- Moni Hotels
- Faistos Hotels
- Rv Parks in Temenos
- Hotel Wedding Venues Hotels in Heraklion
- Galia Hotels
- Casino Hotels in Heraklion
- All-Inclusive Resorts in Heraklion
- Hotels with a Swim-up Bar in Heraklion
- B&B in Heraklion
- Villas in Heraklion
- Adults Only Resorts & in Heraklion
- Venerato Hotels
- Finikia Hotels
- Beach Hotels in Heraklion
- Hotels near General University Hospital of Heraklion
- Archanes-Asterousia Hotels
- Hotel Wedding Venues Hotels in Archanes-Asterousia
- Winery Hotels in Archanes-Asterousia
- Romantic Hotels in Heraklion
- Visit Sokaras
- Visit Petrokefalo
- Visit Paliani
- Visit Panasos
- Visit Kolena
- Visit Apomarma
- Visit Zaros
- Visit Venerato
- Visit Agios Myronas
- Visit Pirgou
- Valis Vacations
- Visit Heraklion
- Visit Archanes-Asterousia
- Heraklion Vacations
- Visit Krousón
- Visit Pendamodi
- Visit Gortyna
- Visit Vourvoulitis
- Visit Laranion
- Visit Valis
- Visit Stavrakia
- Visit Profitis Ilias
- Car rental Siva
- Car rental Valis
- Car rental Zaros
- U-Save Rental Cars in Temenos
- Hiper Rent a Car Rental Cars in Archanes-Asterousia
- Click & Rent Rental Cars in Temenos
- Car rentals near Heraklion
- Luxury Car Rentals in Heraklion
- Minivan Car Rentals in Heraklion
- Van Car Rentals in Heraklion
- Convertible Car Rentals in Heraklion
- Car rental Archanes-Asterousia
