$625 Cheap Flights from Johannesburg (JNB) to Kota Kinabalu (BKI)

View $625 flight on Sat, Nov 22, 2025Opens in a new window

Popular airlines from O.R. Tambo Intl. Airport (JNB) to Kota Kinabalu Intl. Airport (BKI)

Cheap Flights from Johannesburg to Kota Kinabalu (JNB-BKI)

Prices were available within the past 7 days and start at $625 for one-way flights and $1,053 for round trip, for the period specified. Prices and availability are subject to change. Additional terms apply.

Cathay Pacific
Sat, Nov 22 - Mon, Dec 1
JNB
Johannesburg
BKI
Kota Kinabalu
$1,053 Roundtrip, found 5 days ago
$1,053
Roundtrip
found 5 days ago
Select Cathay Pacific flight, departing Sat, Nov 22 from Johannesburg to Kota Kinabalu, returning Mon, Dec 1, priced at $1,053 found 5 days ago
Etihad Airways
Sat, Nov 22 - Mon, Dec 1
JNB
Johannesburg
BKI
Kota Kinabalu
$1,105 Roundtrip, found 5 days ago
$1,105
Roundtrip
found 5 days ago
Select Etihad Airways flight, departing Sat, Nov 22 from Johannesburg to Kota Kinabalu, returning Mon, Dec 1, priced at $1,105 found 5 days ago
Etihad Airways
Sat, Nov 22 - Mon, Dec 1
JNB
Johannesburg
BKI
Kota Kinabalu
$1,110 Roundtrip, found 5 days ago
$1,110
Roundtrip
found 5 days ago
Select Etihad Airways flight, departing Sat, Nov 22 from Johannesburg to Kota Kinabalu, returning Mon, Dec 1, priced at $1,110 found 5 days ago
Etihad Airways
Sat, Nov 22 - Mon, Dec 1
JNB
Johannesburg
BKI
Kota Kinabalu
$1,125 Roundtrip, found 5 days ago
$1,125
Roundtrip
found 5 days ago
Select Etihad Airways flight, departing Sat, Nov 22 from Johannesburg to Kota Kinabalu, returning Mon, Dec 1, priced at $1,125 found 5 days ago
Etihad Airways
Sat, Nov 22 - Mon, Dec 1
JNB
Johannesburg
BKI
Kota Kinabalu
$1,131 Roundtrip, found 5 days ago
$1,131
Roundtrip
found 5 days ago
Select Etihad Airways flight, departing Sat, Nov 22 from Johannesburg to Kota Kinabalu, returning Mon, Dec 1, priced at $1,131 found 5 days ago
Malaysia Airlines
Sat, Nov 22 - Mon, Dec 1
JNB
Johannesburg
BKI
Kota Kinabalu
$1,147 Roundtrip, found 5 days ago
$1,147
Roundtrip
found 5 days ago
Select Malaysia Airlines flight, departing Sat, Nov 22 from Johannesburg to Kota Kinabalu, returning Mon, Dec 1, priced at $1,147 found 5 days ago
Qatar Airways
Sat, Nov 22 - Mon, Dec 1
JNB
Johannesburg
BKI
Kota Kinabalu
$1,152 Roundtrip, found 5 days ago
$1,152
Roundtrip
found 5 days ago
Select Qatar Airways flight, departing Sat, Nov 22 from Johannesburg to Kota Kinabalu, returning Mon, Dec 1, priced at $1,152 found 5 days ago
Etihad Airways
Sat, Nov 22 - Mon, Dec 1
JNB
Johannesburg
BKI
Kota Kinabalu
$1,159 Roundtrip, found 5 days ago
$1,159
Roundtrip
found 5 days ago
Select Etihad Airways flight, departing Sat, Nov 22 from Johannesburg to Kota Kinabalu, returning Mon, Dec 1, priced at $1,159 found 5 days ago
Etihad Airways
Sat, Nov 22 - Mon, Dec 1
JNB
Johannesburg
BKI
Kota Kinabalu
$1,164 Roundtrip, found 5 days ago
$1,164
Roundtrip
found 5 days ago
Select Etihad Airways flight, departing Sat, Nov 22 from Johannesburg to Kota Kinabalu, returning Mon, Dec 1, priced at $1,164 found 5 days ago
Singapore Airlines
Sat, Nov 22 - Mon, Dec 1
JNB
Johannesburg
BKI
Kota Kinabalu
$1,211 Roundtrip, found 5 days ago
$1,211
Roundtrip
found 5 days ago
Select Singapore Airlines flight, departing Sat, Nov 22 from Johannesburg to Kota Kinabalu, returning Mon, Dec 1, priced at $1,211 found 5 days ago

Frequently asked questions

How much does a flight from O.R. Tambo Intl. Airport (JNB) to Kota Kinabalu Intl. Airport (BKI) cost?
Snag a cheap one-way flight from $625 or cheap return flight from $1,053 from O.R. Tambo Intl. Airport (JNB) to Kota Kinabalu Intl. Airport (BKI) with Expedia. Enter your travel dates and sort by "Price (lowest to highest)" to find our cheapest flight offers on this route.
What is the cheapest month to fly from O.R. Tambo Intl. Airport (JNB) to Kota Kinabalu Intl. Airport (BKI)?
The cheapest month to fly from JNB to BKI is November, when demand is low. Off-peak months are often when you'll find lower airfares between these airports.
What is the cheapest airline that flies from O.R. Tambo Intl. Airport (JNB) to Kota Kinabalu Intl. Airport (BKI)?
To find the cheapest airline flying from JNB to BKI, use Expedia's filter tool. Customize your search based on your travel style, such as preferred carriers and cabin class. You can then sort your results by "Price (lowest to highest)" to see the most affordable options first.
How many flights per day from O.R. Tambo Intl. Airport (JNB) to Kota Kinabalu Intl. Airport (BKI)?
Direct flights from O.R. Tambo Intl. Airport (JNB) to Kota Kinabalu Intl. Airport (BKI) aren't available daily, so you'll need to take a flight with a layover. Explore your options with our filter tool. Enter your travel dates and choose either "1 Stop" or "2+ Stops."
What day of the week has the most flights from JNB to BKI?
You'll generally find Tuesday the quietest day for flights, while Fridays tend to be the busiest.* However this can vary from season to season and during peak travel times or public holidays.*Busiest/quietest day to travel is based on Expedia flight demand through January to December 2024.
What is the best time to fly from O.R. Tambo Intl. Airport (JNB) to Kota Kinabalu Intl. Airport (BKI)?
To arrive at Kota Kinabalu Intl. Airport (BKI) without delays, select a flight that takes off from O.R. Tambo Intl. Airport (JNB) before 3 PM. The chance of cancellations is 22% higher, on average, for departures after this time.**Most reliable time of the day and month to travel recommendation is based on January through August 2024 flight status data sourced from OAG's global flight data platform.
Is it cheaper to buy a plane ticket from O.R. Tambo Intl. Airport (JNB) to Kota Kinabalu Intl. Airport (BKI) last-minute?
Booking your ticket from JNB to BKI shortly before your getaway is typically more expensive. But if you're flexible with your schedule, you could grab a cheap last-minute fare.
Is it cheaper to book a JNB to BKI flight and hotel package?
Opting for a JNB to BKI flight and hotel package is generally cheaper than booking separately. With Expedia, you can enjoy the convenience of organizing your travels in one place. Select from our impressive range of accommodations and then add flights, car rentals and activities to your booking. Bundle everything together, and you could save hundreds of dollars.
Can I cancel or change the date of my flight from O.R. Tambo Intl. Airport (JNB) to Kota Kinabalu Intl. Airport (BKI)?
It's usually possible to cancel or reschedule your JNB to BKI flight. However, for bookings made more than 24 hours ago, additional fees may apply. Check your airline's policies in your itinerary to see what changes are allowed and whether any costs are involved. You'll also find more information on our Customer Service portal.

Travel information

Origin airport
O.R. Tambo Intl.
Destination airport
Kota Kinabalu Intl.
Roundtrip price
$1,052
Distance
6263 mi

Book with confidence

Johannesburg to Kota Kinabalu Flights

The cheapest times to fly from Johannesburg to Kota Kinabalu

On average, Thursday can be the cheapest time to fly, according to data from the Airlines Reporting Corporation (ARC), one of the world's biggest databases for global airline sales. The data reveals that you could save up to 16% by flying on a Thursday—the cheapest day to travel on average—instead of a Sunday—the most expensive. Some of the most affordable flights from Johannesburg to Kota Kinabalu are during the month of November. You can find some of the cheapest flights from Johannesburg to Kota Kinabalu with Expedia's search tool and vast selection of airlines.

 

The best time to book a flight from Johannesburg to Kota Kinabalu

Sunday is one of the best days to book for cheap flights from Johannesburg to Kota Kinabalu: Tickets reserved on a Sunday cost between 6% and 13% less than those reserved on a Friday, according to ARC data. The data also suggests booking early can also lead to cheaper airfares. You could save 24% by buying your tickets for domestic flights at least a month in advance and 10% by booking international flights 2 months in advance.

 

How to find cheap round-trip tickets from Johannesburg to Kota Kinabalu

Being flexible with your dates and using Expedia's Price Drop Protection and Price Tracking features are some of the best ways of finding a cheap ticket from Johannesburg to Kota Kinabalu in 2025. You can also book with separate airlines for your outbound and return journeys, from $625 one-way. Expedia also offers Price Drop Protection, so if the cost of your airfare goes down after booking, you'll receive a credit for the difference*. This is available for a small fee, and is free to One Key Gold and Platinum tier members.

 

Expedia's Price Tracking feature means you can stay on top of airfares without manually checking every day. It sends you automated price alerts for cheap Johannesburg to Kota Kinabalu flights and uses historical data to indicate when the best time to book is. Download Expedia's free app to activate this handy tool in a few easy taps.

 

You could also save big by booking one of Expedia's vacation packages. Bundling together your Johannesburg to Kota Kinabalu airfare with your accommodations and car rental is often cheaper than booking everything separately. There’s also One Key, Expedia's generous rewards program. Join for free and you could earn One Key cash on most bookings to save on future adventures.

 

*Terms apply.

 

Disclaimer: ARC The statistics are based on average round-trip ticket prices between January and August 2023. The percentages you see are averages.

 

Johannesburg to Kota Kinabalu Flights

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*Available to One Key members.