Kyoto Prefecture Resorts & Hotels with Spas from $65

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Top cities in Kyoto Prefecture

A traditional Japanese building surrounded by autumn foliage.

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Our top choices for Kyoto Prefecture hotels with a spa

A modern indoor swimming pool with a jacuzzi, tiled walls, and recessed lighting.

1. sequence KYOTO GOJO

Shimogyo Ward

Serene Kyoto retreat invites rejuvenation with a full-service spa, hot tub, and indoor public bath for total relaxation.

$64 nightly

Dec 6 - Dec 7

A spa area with a large hot tub, a checkered floor, and a view through large windows.

2. Hotel Monterey Kyoto

Downtown Kyoto

Elegant Kyoto hotel offers Japanese wellness with hot springs, mud bath, sauna, and spa for restoration.

$87 nightly

Dec 13 - Dec 14

A traditional Japanese interior with a tatami mat floor, a wooden barrel, and a view of a hot spring bath.

3. Dormy Inn Premium Kyoto Ekimae Natural Hot Spring

Shimogyo Ward

Soak in natural hot springs at this Kyoto hotel with 3 hot tubs, full spa services, and mineral baths.

$83 nightly

Dec 14 - Dec 15

A modern building with a central staircase illuminated by blue lights, surrounded by glass railings and a pool.

4. THE THOUSAND KYOTO

Shimogyo Ward

Tranquil spa sanctuary in Kyoto with couples treatment rooms and deep-soaking tubs for pure relaxation.

$222 nightly

Dec 13 - Dec 14

A hot tub on a wooden deck with a view of trees and hills.

5. Yunohana Resort Suisen

Yunohana

Unwind in a traditional Japanese spa retreat with private onsen baths, couples treatment rooms, and elegant kaiseki dining experiences.

$537 nightly

Dec 4 - Dec 5

A spa area with a hot tub, wicker chairs, and tiled flooring.

6. APA Hotel Kyoto Eki Horikawadori

Shimogyo Ward

Experience a tranquil escape at this Kyoto spa hotel with an indoor public bath and in-room massage services.

$41 nightly

Dec 13 - Dec 14

A modern hotel lobby with a reception desk, seating area, and decorative pillars.

7. RIHGA Royal Hotel Kyoto

Shimogyo Ward

$79 nightly

Dec 13 - Dec 14

A stone-walled hot tub with a water feature and a clock.

8. Onyado Nono Kyotoshichijo Natural Hot Springs

Shimogyo Ward

Relax in tranquil hot springs at this Kyoto hotel where traditional Japanese comforts meet spa amenities for a rejuvenating retreat.

$93 nightly

Nov 15 - Nov 16

A traditional Japanese onsen with a stone hot spring, bamboo walls, and a wooden ceiling.

9. Hotel Kuu Kyoto

Shimogyo Ward

Authentic Japanese onsen at Kyoto hotel offers calming soaks near historic temples with modern comforts.

$64 nightly

Dec 14 - Dec 15

A public restroom with wooden walls, multiple sinks, and benches.

10. Yunoyado SYOUEI

Shimogyo Ward

Unwind in a traditional Japanese ryokan with serene garden views, soothing onsen baths, and rejuvenating massage services.

$123 nightly

Dec 8 - Dec 9

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Top Kyoto Prefecture Hotel Reviews

A wooden water feature with a wooden box structure, a black tiled wall, and a reflective water surface.

Kyoto Omuro Kadensho（Kyoritsu Resorts）

Ukyo Ward

10/10 Excellent

Weimin

A modern living room with a dining area, large windows, and a view of a cityscape.

Kamo Residences by Reflections

Central Kyoto

10/10 Excellent

James Alexander

A modern spa with wooden walls, a hot tub, and a pebble-lined floor.

MACHIYA de SAUNA

Minami Ward

10/10 Excellent

The selling point of this property is the sauna and outdoor baths. We didn’t end up using the sauna (it was 90 degrees outside) so we simply enjoyed the two baths. It was nice to do a load of laundry in the middle of our trip and while we only made tea, the kitchen was convenient and useful for folks staying longer. It’s a short walk to the station and close to many things. The house is very charming and would be perfect for a family.

Adriana

A modern indoor pool area with a glass enclosure, a seating area with cushions, and a flat-screen TV mounted on the wall.

Mitsui Garden Hotel Kyoto Sanjo PREMIER

Downtown Kyoto

10/10 Excellent

Nila

A modern spa area with a stone wall, a hot tub, and metal railings.

yugen kyoto shijo

Shimogyo Ward

10/10 Excellent

Marcus

A traditional Japanese interior with tatami flooring, sliding doors, and a rock garden.

Hotel Kanra Kyoto

Shimogyo Ward

10/10 Excellent

This hotel was the best out of the hotels we stayed at on our two week trip (3 hotels total). If you’re looking for a great hotel in Kyoto it’s this hotel. Room was clean and beautiful. Bed was excellent (all other beds we slept on were hard and bad). Bathroom was great! Close to the subway and bus stop (use the bus - super easy, fast and clean). Next door to convenience store (very helpful). Blocks from Kyoto station (also very helpful). One block from a beautiful shrine. Coin-op laundromat...

Anonymous traveler