A lighthouse on a rocky coastline with the ocean in the foreground.

Search Inns in San Juan Islands

  • Bundle & Save

    Get more, spend less whenever you see Bundle & Save deals

  • OneKeyCash

    Earn OneKeyCash on all your eligible bookings

  • Upfront pricing

    We are not like the others - we include taxes and fees

Check prices for these dates

Next weekend
Sep 25 - Sep 27
In two weeks
Oct 2 - Oct 4
In one month
Oct 16 - Oct 18
In two months
Nov 13 - Nov 15
No exact matches found, but these alternatives could be just right

Recommended hotels in San Juan Islands

A motel with a row of rooms, a parking lot, and blooming flowers in the foreground.

1. The Orca Inn

The Orca Inn
2.0 star property
Friday Harbor
8.2 out of 10, Very good, (151 reviews)
"Nice place .. walking distance from the ferry ..staff was super nice will stay again"
United States
Andrew
$107 nightly
The price is $118
Oct 17 - Oct 18
Total with taxes and fees
The Orca Inn
A modern interior with sofas, a table, and hanging plants.

2. Friday Harbor Suites

Friday Harbor Suites
2.5 star property
Friday Harbor
8.6 out of 10, Excellent, (1,002 reviews)
"Great place to stay while visiting Friday Harbor"
United States
Jennifer
$176 nightly
The price is $195
Oct 12 - Oct 13
Total with taxes and fees
Friday Harbor Suites
A marina with boats, a cruise ship, and a forested island.

3. Bird Rock Hotel

Bird Rock Hotel
2.0 star property
Friday Harbor
8.8 out of 10, Excellent, (394 reviews)
"We loved our stay! The room was clean and comfortable and the location was perfect. There were plenty of shops and places to eat nearby, and the air conditioning worked great. It was a beautiful and convenient place to stay for our trip. We would definitely stay here again!"
United States
Vanessa
$160 nightly
The price is $177
Oct 1 - Oct 2
Total with taxes and fees
Bird Rock Hotel
A living room with a sofa, armchairs, a coffee table, and a fireplace.

4. Earthbox Inn & Spa

Earthbox Inn & Spa
3.0 star property
Friday Harbor
8.8 out of 10, Excellent, (1,003 reviews)
"Very nice and cozy place to stay."
United States
Nicole
$230 nightly
The price is $255
Oct 1 - Oct 2
Total with taxes and fees
Earthbox Inn & Spa
A building with a covered outdoor area, red doors, and hanging flower baskets.

5. Discovery Inn

Discovery Inn
2.0 star property
Friday Harbor
10.0 out of 10, Exceptional, (45 reviews)
"Clean quiet good parking good wifi"
United States
Victoria
$155 nightly
The price is $171
Oct 17 - Oct 18
Total with taxes and fees
Discovery Inn
A wooden pier leading to a building with large windows and a flagpole.

6. Lopez Islander Resort

Lopez Islander Resort
3.5 star property
Lopez Island
8.6 out of 10, Excellent, (422 reviews)
"The perfect marina stay on Lopez. Excellent location. Charming outside seating areas and restaurant. The room was nicely outfitted and the deck had a wonderful West-facing marina and sunset view. A great place for an island stay."
United States
Diane
$179 nightly
The price is $198
Oct 1 - Oct 2
Total with taxes and fees
Lopez Islander Resort
A lakeside view with a wooden deck and chairs, a covered area with columns, and a calm lake with distant hills.

7. Rosario Resort

Rosario Resort
2.0 star property
Eastsound
7.6 out of 10, Good, (177 reviews)
"Very relaxing stay"
United States
David
$178 nightly
The price is $196
Oct 7 - Oct 8
Total with taxes and fees
Rosario Resort
A two-story house with a front porch, a picket fence, and a small garden area.

8. Tucker House Inn

Tucker House Inn
4.0 star property
Friday Harbor
9.2 out of 10, Wonderful, (300 reviews)
"A great place to stay. I highly recommend!"
United States
ZACHARY
$194 nightly
The price is $215
Oct 12 - Oct 13
Total with taxes and fees
Tucker House Inn
A large, two-story house with a well-maintained lawn and a brick pathway leading to the front door.

9. The Edenwild Boutique Inn

The Edenwild Boutique Inn
2.5 star property
Lopez Island
9.4 out of 10, Exceptional, (276 reviews)
"The staff was fantastic and the breakfast was one of the best we have had at a hotel."
United States
Frances
$189 nightly
The price is $208
Sep 17 - Sep 18
Total with taxes and fees
The Edenwild Boutique Inn
Two people relaxing by a fire pit with a view of a harbor and a large ship.

10. Friday Harbor House

Friday Harbor House
3.5 star property
Friday Harbor
9.6 out of 10, Exceptional, (282 reviews)
"Great location and beautiful back yard to watch the harbor from!"
United States
Robert
$439 nightly
The price is $486
Oct 6 - Oct 7
Total with taxes and fees
Friday Harbor House
A waterfront property with multiple buildings, including a large house with a prominent roof and a smaller structure with a chimney.

11. Outlook Inn

Outlook Inn
3.0 star property
Eastsound
9.2 out of 10, Wonderful, (527 reviews)
"Loved the fireplace and balcony."
United States
Amado
$335 nightly
The price is $370
Sep 28 - Sep 29
Total with taxes and fees
Outlook Inn
A serene outdoor seating area with a table and chairs, surrounded by lush greenery and a tree.

12. Trumpeter Inn

Trumpeter Inn
3.0 star property
Friday Harbor
10.0 out of 10, Exceptional, (274 reviews)
"A magical stay with amazing breakfast each day and cute farm animals to visit. Loved everything about it 💗"
United States
James
$230 nightly
The price is $254
Oct 1 - Oct 2
Total with taxes and fees
Trumpeter Inn
An aerial view of a coastal marina with boats docked, surrounded by lush greenery and residential areas.

13. Deer Harbor Inn

Deer Harbor Inn
3.0 star property
Deer Harbor
8.4 out of 10, Very good, (223 reviews)
"It was comfy!"
United States
Nemo
$203 nightly
The price is $224
Oct 16 - Oct 17
Total with taxes and fees
Deer Harbor Inn
A wooden cabin interior with a dining table, chairs, and a bench.

14. Snug Harbor Resort

Snug Harbor Resort
2.5 star property
Friday Harbor
9.8 out of 10, Exceptional, (539 reviews)
"What a beautiful peice of quiet paradise. Sunrise is beautiful by the water and we had fabulous sleep in the Cabins. Would definitely recommend!!"
United States
Patricia
$299 nightly
The price is $330
Oct 8 - Oct 9
Total with taxes and fees
Snug Harbor Resort
A wooden deck with a table and grill, overlooking a lake with a distant bridge.

15. West Beach Resort

West Beach Resort
3.5 star property
Eastsound
9.4 out of 10, Exceptional, (120 reviews)
"Cozy and roomy cabin. Great stay. "
United States
lorrie
$211 nightly
The price is $233
Oct 12 - Oct 13
Total with taxes and fees
West Beach Resort
A marina with boats docked in a structured layout, surrounded by water and a distant cityscape.

16. Roche Harbor Resort

Roche Harbor Resort
3.0 star property
Friday Harbor
9.2 out of 10, Wonderful, (453 reviews)
"Hotel was lovely, highly recommend."
United States
Nicco
$250 nightly
The price is $276
Oct 12 - Oct 13
Total with taxes and fees
Roche Harbor Resort
A wooden deck with a railing, potted plants, and hanging flower baskets.

17. Kangaroo House B&B on Orcas Island

Kangaroo House B&B on Orcas Island
3.5 star property
Eastsound
10.0 out of 10, Exceptional, (181 reviews)
"The breakfast was delicious and healthy, and the house was very nice and comfortable."
United States
Kaitlyn
$251 nightly
The price is $277
Sep 20 - Sep 21
Total with taxes and fees
Kangaroo House B&B on Orcas Island
A two-story building with a covered porch, surrounded by a variety of flowering plants.

18. Friday Harbor Grand B&B

Friday Harbor Grand B&B
3.0 star property
Friday Harbor
9.6 out of 10, Exceptional, (148 reviews)
"Amazing breakfast and what a great host!"
United States
Andrew
$393 nightly
The price is $435
Sep 22 - Sep 23
Total with taxes and fees
Friday Harbor Grand B&B
A wooden deck with outdoor seating, a sign reading "EMILY'S COTTAGE", and a view of a road with cars.

19. Emily's Cottage at Cayou Channel - Orcas Island

Emily's Cottage at Cayou Channel - Orcas Island
Orcas Island
9.6 out of 10, Exceptional, (7 reviews)
"Great location, close to ferry!"
United States
Jonas R.
$408 nightly
The price is $439
Sep 18 - Sep 19
Total with taxes and fees
Emily's Cottage at Cayou Channel - Orcas Island
A marina with boats, a stone bridge, and a well-maintained grassy area.

20. Bayside Queen_Ocean Front_Island Views

Bayside Queen_Ocean Front_Island Views
Eastsound
6.0 out of 10, (1 review)
"Clean and comfortable. Beautiful bay. Very quiet. Good internet once you signed into the network. Check-in would have been just fine (the communication was good to ensure contact with the virtual front desk, in a spotty internet area) but I don’t believe our keypad was programmed correctly. Fortunately, a maintenance guy just happened to be in the building and was able to correct the problem. "
United States
Sharon B.
$163 nightly
The price is $163
Oct 7 - Oct 8
Total with taxes and fees
Bayside Queen_Ocean Front_Island Views
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Top San Juan Islands Hotel Reviews

Roche Harbor Resort

Roche Harbor Resort

10/10 Excellent
"Quaint, charming! Had Capt Suite with view & private bath. Lovely view of harbor. Surprisingly quiet given hotel’s age.great dinner @McMillians. Definitely recommend. Sculpture part is lovely way to wander."
Lauran 2-night trip
Posted 19 hours ago
Roche Harbor Resort

Find out more about San Juan Islands

San Juan Islands Inns information

Number of reviews
4,028
Accommodation
1 Inns
Lowest Price
$118
Highest Price
$486

Frequently asked questions

Why book your San Juan Islands inn with Expedia?
With Expedia, you'll have no trouble finding your dream inn in San Juan Islands. If you have a fixed budget, select how much you're willing to spend and the star rating of your hotel. Or make your way to the filters to search for properties with amenities like a pool. We'll help you lock in the perfect place whatever your vacation looks like.
How can I find cheap San Juan Islands inns?
You can find cheap San Juan Islands inns on Expedia by putting your destination and dates into the search box. Then, narrow your search results by star rating, amenities and budget. You can also sort your results by price so that the cheapest stays appear at the top of the page.

Explore a world of travel with Expedia