Top 10 Hotels in Seneca, WI (from $57) 2026 - Competitive Prices

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Our top choices for Seneca hotels

An indoor dining area with tables and chairs, wooden planters with plants, and hanging light fixtures.

A multi-story building with a parking lot in front.

A sunset view over a lake with a bench and ferns in the foreground.

A living room with a fireplace, leather sofas, a coffee table, and a television.

1. Waterfront Hotel

Prairie Du Chien

Robert

$134 nightly

$150 total

Oct 4 - Oct 5

Total with taxes and fees

An indoor swimming pool with a blue interior, surrounded by a seating area with blue cushions and wicker furniture.

A reception area with a stone wall, wooden reception desk, and a herringbone patterned floor.

A patio area with outdoor seating and a covered section, adjacent to a building with large windows.

A dining area with multiple tables and chairs, a kitchen area with appliances, and a blue wall.

2. AmericInn by Wyndham Prairie du Chien

Prairie Du Chien

Robert

$75 nightly

$83 total

Nov 1 - Nov 2

Total with taxes and fees

A bear in an indoor water park with slides and a tree-like structure.

A hot tub with a rocky backdrop, a metal ladder, and a tiled edge.

A hotel room with a bed, a desk with a computer, a TV, and a window with curtains.

A bar area with a wooden counter, black bar stools, and a mounted deer head.

3. Country Inn & Suites by Radisson, Prairie du Chien

Prairie Du Chien

Jeannie

$81 nightly

$90 total

Nov 1 - Nov 2

Total with taxes and fees

A modern living room with a sofa, coffee table, and red chairs. There is a kitchen area with a counter and appliances. A fireplace is visible in the background.

A reception desk at Windsor Place Inn with a stone wall backdrop, a clock, and a Dell computer.

A hotel room with two beds, a kitchenette, a microwave, and a television.

A spacious living room with a fireplace, a sofa set, and a coffee table.

4. Windsor Place Inn

Southside

John

$61 nightly

$68 total

Nov 1 - Nov 2

Total with taxes and fees

A wooden deck with a white railing, surrounded by greenery and a stone wall.

A cozy log cabin bedroom with a large bed, two wall-mounted lamps, a ceiling fan, and a rustic decor.

A patio area with a stone fire pit, outdoor seating, and string lights.

A room with a sliding glass door leading to a deck, a small table with chairs, a wooden cabinet, and a trash can.

5. Trickling Waters Retreat

Marquette

Joe and Sherry

$89 nightly

$100 total

Nov 1 - Nov 2

Total with taxes and fees

A wooden cabin-style room with a large mirror, a bed, a vanity with a mirror, and a bathtub.

An indoor swimming pool with a wooden ceiling, lounge chairs, and potted plants.

A hotel reception desk with a sign reading "Quality by Choice Hotels," a digital check-in kiosk, a telephone, and a vase with flowers.

A modern living room with a sofa, armchairs, and a coffee table. There is a kitchen area with a microwave, refrigerator, and a dining table with chairs.

6. Quality Inn & Suites Prairie Du Chien

Southside

Merlin

$66 nightly

$73 total

Oct 11 - Oct 12

Total with taxes and fees

A wooden cabin with a swimming pool, large windows, and a patio area.

A bar area with multiple tables and chairs, a counter with a neon sign, and a display of liquor bottles.

A hotel room with a large bed, a sofa, a small table, a desk, a chair, a lamp, a painting, and a bathroom with a bathtub.

A compact hotel room with a kitchenette, a small refrigerator, a microwave, a sink, and a sofa.

7. AmericInn by Wyndham Boscobel

Boscobel

Robert

$93 nightly

$102 total

Oct 7 - Oct 8

Total with taxes and fees

A hotel room with two beds, a desk with a computer, a TV, and a window with curtains.

A hotel reception area with a coffee machine, a refrigerator, and a self-service beverage dispenser.

A covered pavilion with a stone plaque, a picnic area, and a view of the mountains.

A spacious room with a large window, a sofa, a small table, and a carpeted floor.

8. Comfort Inn & Suites Marquette - Prairie du Chien

Marquette

Mark

$72 nightly

$81 total

Nov 1 - Nov 2

Total with taxes and fees

A hotel room with a bed, a desk with a computer, a chair, a TV, and a large window with curtains.

A hotel room with a desk, chair, television, lamp, and a window with curtains.

A bathroom with a shower curtain, a towel rack with towels, and a toilet.

A hotel room with a bed, a sofa, and two large wall-mounted pictures.

9. Northwood Inn Prairie Du Chien

Southside

Lance

$61 nightly

$68 total

Oct 30 - Oct 31

Total with taxes and fees

A restaurant with tables and chairs, a stone fireplace, and a kitchen area with appliances.

A bathroom with a large mirror, a sink, and a toilet.

A hotel room with two beds, a nightstand with a phone and a lamp, and a carpeted floor.

A building with a covered entrance, brick pillars, and a parking lot with marked spaces.

10. AmericInn by Wyndham Viroqua

Viroqua

JOSE

$91 nightly

$104 total

Oct 4 - Oct 5

Total with taxes and fees

A hotel lobby with striped sofas, a wooden reception desk, a clock, and a flat-screen TV on the wall.

A hotel room with a large bed, two bedside lamps, a nightstand with a phone and clock, and a framed picture on the wall.

A living room with two sofas, a coffee table, and a television.

A long, narrow hallway with carpeted floors and doors on both sides leading to individual rooms.

11. Old Towne Motel

Westby

Knox

A modern hotel room with a kitchenette, a bed, a sofa, and a TV.

A Microtel hotel with a flat facade, multiple windows, and a flagpole.

A hotel lobby with a reception desk, seating area, and large windows.

12. Microtel Inn & Suites by Wyndham Prairie du Chien

Southside

TAMMY

$71 nightly

$79 total

Oct 4 - Oct 5

Total with taxes and fees

A bedroom with a bed, two white wicker chairs, a small white table, and a wooden floor.

A motel with a signboard, a parking lot, and a road in front.

A bedroom with a large bed, two white wicker chairs, a nightstand with a phone, and a window with blinds.

A bathroom with two sinks, a mirror, and a shower area.

13. Prairie Voyager

Southside

Scott

$78 nightly

$86 total

Oct 5 - Oct 6

Total with taxes and fees

A cozy room with a piano, green walls, and a brick fireplace.

A kitchen with a checkered countertop, a refrigerator, a microwave, and bar stools.

A bar area with a bookshelf, stools, and a window with a view of the street.

14. Fenway House Hotel

Fennimore

Teresa

$108 nightly

$114 total

Nov 1 - Nov 2

Total with taxes and fees

A white door with a small window, a number '2' above it, and a hanging light fixture.

A building with a white and dark gray facade, two doors, a small patio with a table and chairs, and a wheelchair accessibility sign.

A compact living space with a sofa, kitchenette, and a small dining area.

A living room with a sofa, coffee table, and artwork on the wall.

15. Tobacco Warehouse Inn

Soldiers Grove

Ezra

$230 nightly

$254 total

Oct 5 - Oct 6

Total with taxes and fees

A hotel room with two beds, a nightstand, a lamp, and two paintings on the wall.

A compact kitchenette with a microwave, refrigerator, and coffee maker on a small table.

A hotel room with a bed, a desk, and a chair.

A bathroom with a toilet, sink, and shower.

16. MIDWAY MOTEL

Viroqua

Peter

$100 nightly

$111 total

Oct 4 - Oct 5

Total with taxes and fees

A wooden deck with a railing, a hanging wind chime, and a view of the sunset.

A living room with a wooden ceiling, a television, a sofa, a chair, and a wooden cabinet.

A bathroom with a large bathtub, wooden flooring, and potted plants.

A rustic cabin with a stone facade, wooden deck, and a large porch.

17. Hydro-Massage Tub! Wrangler Outlaw Suite! Horses!

Eastman

Lisa

$186 nightly

$196 total

Oct 5 - Oct 6

Total with taxes and fees

A compact room with two beds, a kitchenette, and a TV mounted on the wall.

A row of red cabins with a white house in the background, surrounded by autumn foliage.

A compact kitchen with a red microwave, a coffee maker, and a sink.

A small wooden cabin with a single door and a window, a bench, and a table outside.

18. Scenic Valley Motel

Lansing

Jason

$91 nightly

$102 total

Oct 4 - Oct 5

Total with taxes and fees

A historic building with a sign reading "American House 1854."

A four-poster canopy bed with a dark wooden frame, a tufted headboard, and a plush grey bedspread. There is a wooden floor and a patterned rug in front of the bed.

A room with a patterned wallpaper, a wooden chair, a small table, and a painting on the wall.

A room with wooden flooring, a large mirror, and two upholstered chairs.

19. American House 1854- Stagecoach Stop Suite, 2 Bedrooms, Kitchenette, Sleeps 6

McGregor

Shengying

$274 nightly

$307 total

Oct 4 - Oct 5

Total with taxes and fees

A cozy room with a sofa, a chair, a small table, and a large window.

A covered outdoor seating area with a table and chairs, a wooden deck, and a staircase leading to a brick building.

A room with a ceiling fan, a chandelier, a sofa, a chair, and a patterned rug.

A street view with buildings, a road, and autumn trees.

20. American House 1854- Pocket City Penthouse, 2 Bedrooms, Full Kitchen & Dining

McGregor

Lisa

$288 nightly

$323 total

Oct 4 - Oct 5

Total with taxes and fees

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Where to stay near Seneca

Discover the charm of Seneca, where outdoor enthusiasts and families can enjoy breathtaking scenery and adventure. Explore nearby parks for hiking, relax in nature's embrace, or embark on thrilling excursions. Experience the welcoming atmosphere that makes Seneca a perfect destination for wellness and relaxation.

A river with a dam and a town along its banks.

A calm river reflecting autumn foliage, surrounded by hills.

Ferryville

Discover Ferryville, a charming destination perfectly suited for adventure seekers and families who will appreciate its stunning outdoor scenery. Nestled near a river and a lake, Ferryville offers ample opportunities for hiking, exploring trails, and enjoying recreational areas, making it an ideal base for nature enthusiasts. Located about 14 miles by car from Seneca, this city is easily accessible and provides a welcoming atmosphere for travelers year-round. Ferryville is a smart choice for your next hotel booking, combining convenience with natural beauty.

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Mount Sterling

Plan your stay in Mount Sterling, a top-rated choice for travelers seeking a weekend getaway, family fun, and nature experiences. This charming city offers access to delightful attractions like Lynxville Park, perfect for enjoying the outdoors, along with local shopping centers for a bit of retail therapy. With its peak visitor season in October and December to January, Mount Sterling is ideally located about 4 miles from Seneca, making it an excellent choice for a memorable vacation.

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A river winding through a forested landscape with a railway track alongside it.

A river winding through a forested landscape with a prominent tree trunk in the foreground.

A river with a dam, surrounded by greenery and a clear sky.

A river surrounded by dense green forest and hills in the background.

A tree-lined landscape with a river and fields.

Harpers Ferry

Make your vacation planning effortless by staying in Harpers Ferry, a haven for adventure seekers and nature lovers due to its stunning outdoor experiences. With attractions like the Yellow River State Forest and Harpers Ferry City Park, visitors can enjoy hiking, golfing, and family-friendly activities. Located about 43 miles by car from Seneca, Harpers Ferry offers a perfect blend of natural beauty and recreational opportunities, making it a smart choice for your next getaway.

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Lynxville

Lynxville stands out as a prime spot for travelers seeking family-friendly adventures and nature experiences. Nestled near a national state park and surrounded by scenic rivers and lakes, this village offers a wealth of outdoor activities, including recreational areas and golf courses. With Lynxville Park and the charming Immaculate Conception - Wexford Church nearby, visitors can enjoy tranquil strolls and community vibes. Located about 7 miles by car from Seneca, Lynxville is an ideal base for your Wisconsin getaway.

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A sunlit field with scattered clouds and a distant hill.

Gays Mills

Travelers seeking a family-friendly getaway will find Gays Mills to be the ideal base for their vacation, featuring stunning natural scenery and a variety of outdoor adventures. With attractions like Lynxville Park and the nearby national state park, visitors can immerse themselves in the area's beautiful landscapes. Gays Mills is conveniently located about 6 miles from Seneca, making it easy to explore both locations. Choosing Gays Mills for your stay ensures a memorable experience filled with adventure and relaxation.

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Stay near popular attractions around Seneca

Nestled in nature’s embrace, Seneca offers breathtaking scenery and outdoor adventures. Explore serene lakes, charming islands, and picturesque parks, perfect for romantic getaways or family fun. Whether you seek relaxation or adventure, Seneca promises memorable experiences for every traveler.

Immaculate Conception - Wexford Church

8.4/10 (6 reviews)

Experience the best of cultural exploration at Immaculate Conception - Wexford Church, a charming site in Lansing, Iowa. This church offers unique architectural beauty and a serene atmosphere. It's about a 35-mile drive from Seneca, making it a convenient stop for your travels through the area.

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Kickapoo River

8.8/10 (33 reviews)

Often cited as a favorite among outdoor enthusiasts, Kickapoo River offers stunning scenery and a vibrant atmosphere for a memorable day out. Located about 13 miles from Seneca, this picturesque river invites visitors to immerse themselves in nature. Staying nearby provides easy access to its serene beauty.

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Lynxville Park

Ideal for families seeking outdoor adventures, Lynxville Park offers a vibrant space filled with recreational opportunities and city vibes. Located about 7 miles by car from Seneca, this urban park provides a perfect spot for relaxing and enjoying nature. Staying near Lynxville Park ensures easy access to its delightful amenities.

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Lynxville Library

No trip is complete without a visit to Lynxville Library, a charming spot perfect for families seeking a cultural experience. Located about 7 miles by car from Seneca, this inviting library offers a warm atmosphere and a wealth of resources, making it an easy and delightful stop during your vacation.

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Eastman

An essential stop for outdoor lovers, Gordons Bay offers stunning scenery and romantic beach vibes. This picturesque lake, located about 10 miles from Seneca, is perfect for a day of relaxation and enjoyment. Staying near Gordons Bay allows easy access to its charming natural beauty.

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Harpers Ferry

A fascinating mix of romance and scenic beauty, Gimmel Lake offers a tranquil escape for outdoor lovers. With its inviting beach vibes, it's perfect for those seeking relaxation or adventure. Located about 9 miles from Seneca, this picturesque spot makes for a convenient day trip or a serene getaway.

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Harpers Ferry City Park

Perfectly suited for families seeking outdoor adventures, Harpers Ferry City Park offers a serene environment with eco-friendly vibes. Enjoy scenic views and recreational activities in this inviting park, located about 11 miles from Seneca, making it a convenient stop for those exploring the area.

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Rittenhouse Lake

A stellar choice for outdoor lovers, Rittenhouse Lake offers a romantic setting with stunning scenery and inviting beach vibes. Located about 9 miles from Seneca, this picturesque spot is perfect for a relaxing getaway, making it easy to enjoy the natural beauty of the area.

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Top Seneca Hotel Reviews

Log Cabin next to the Mississippi River

10/10 Excellent

"I just loved the nostalgic somewhat western way it was decorated. I've stayed in many condos since 2002. None even came close to being to having all the utensils etc as this one. On top of that there were other things you would never expect like sandwich bags sugar ice in the ice trays and on and on. Very unique setting outside- you'd have to see it to know its like noother."

Country Inn & Suites by Radisson, Prairie du Chien

10/10 Excellent

"Room was clean & comfortable & the staff personnel were respectful. The only problem we had was the pool wasn’t clean enough for us to feel comfortable getting into. The hot tub was fine."

Quality Inn & Suites Prairie Du Chien

10/10 Excellent

"Breakfast had waffles, eggs, sausage, etc. No issues with the bed, as we have "temperamental" backs. Room very clean. It was very nice to see a TV listing guide in the room."

Hydro-Massage Tub! Wrangler Outlaw Suite! Horses!

8/10 Good

"Honestly wasn't my choice in cabins, an hour SW of where I was looking. Other VRBOs were snatched up within a few hours (8 to be exact) so I was desperate for a spot for my family with two young adult children. Both recliners were broken, not able to to use for a single sleeping arrangement. There is no stove and the toaster oven was broken but still out on the small kitchenette counter. We made do but my son slept poorly on wide defunct recliner. Host was nice and personable. Probably won't return for various reasons."

Scenic Valley Motel

10/10 Excellent

"Staff were extremely helpful, place was very quiet. Hotel room was clean., very affordable. Well worth the money for the stay experience."

Northwood Inn Prairie Du Chien

8/10 Good

"price"

Romantic Get-a-Way!! 1954 Rail Road Caboose!! Relaxing Hot Tub!

10/10 Excellent

"Excellent host, clean property and relaxing setting"

AmericInn by Wyndham Prairie du Chien

10/10 Excellent

"good hotel"

Log Cabin/ w hot tub, outdoor pool & pool table

10/10 Excellent

"Great place to stay. Great indoors and even better outdoor activities nearby."

More cheap stays in Seneca

SANDS MOTEL

300 Elm St Boscobel WI

$52 nightly

$57 total

Oct 5 - Oct 6

Total with taxes and fees

Northwood Inn Prairie Du Chien

1930 S Marquette Rd Prairie Du Chien WI

$61 nightly

$68 total

Oct 30 - Oct 31

Total with taxes and fees

Quality Inn & Suites Prairie Du Chien

37268 US Highway 18 Prairie Du Chien WI

$66 nightly

$73 total

Oct 11 - Oct 12

Total with taxes and fees

8.4/10 Very Good! (505 reviews)

Microtel Inn & Suites by Wyndham Prairie du Chien

1833 S Marquette Road Prairie Du Chien WI

$71 nightly

$79 total

Oct 4 - Oct 5

Total with taxes and fees

Prairie Voyager

1010 S Marquette Rd Prairie Du Chien WI

$78 nightly

$86 total

Oct 5 - Oct 6

Total with taxes and fees

Scenic Valley Motel

1608 Main St Lansing IA

$91 nightly

$102 total

Oct 4 - Oct 5

Total with taxes and fees

8.2/10 Very Good! (147 reviews)

Hotels in Seneca with star-rating

Frequently asked questions

What is the best area to stay in Seneca?

The best area to stay in Seneca is the downtown district, particularly around Main Street, for its convenient access to local attractions and establishments.Downtown Seneca offers a central base for exploring the town. Along Main Street, you'll find a variety of local shops, eateries, and historic buildings, making it a pleasant area for a stroll. The area is also close to the Seneca River, providing scenic views and easy access for outdoor activities.Travelers looking for a relaxed and central experience will find downtown Seneca ideal. Its walkability means you can easily access local dining options and unique boutiques without needing a car.

When is the best time to go to Seneca?

The best time to visit Seneca is during the late spring and early fall months, specifically from May to June and September to October.These periods offer comfortable temperatures, typically ranging from the mid-60s to low 70s Fahrenheit, making it ideal for outdoor activities like hiking and exploring the local scenery. The natural beauty of the Wisconsin River Valley is particularly striking during these times, with lush greenery in spring and vibrant fall foliage.Travelers looking for a peaceful getaway often find these months appealing.

Can I cancel my hotel reservation on Expedia?

You can cancel your hotel reservation on Expedia, though it depends on the cancellation policy of your booking. Most bookings are refundable if canceled within 24-48 hours of the scheduled arrival. Be sure to check your booking confirmation for the exact cancellation policy. If free cancellation is available, you can cancel directly through your Expedia account by logging in, going to "My Trips", and selecting your reservation. To find flexible deals, filter your search by "Fully refundable property" for hotels in Seneca.

How much is the nightly rate at a Seneca hotel?

Prices for hotels in Seneca often vary, but you can find a great deal from $57 on Expedia. All sorts of factors affect price, such as the time of year or the days of the week you choose for your stay. Find the best deals by being flexible with your dates, and sort search results by "Price: low to high" for the cheapest rate.

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Boscobel Vacation Rentals

Find hotels in Seneca, WI from $57

Upfront pricing

Treat yourself

Be picky

Go beyond your typical stay in Seneca

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for Seneca hotels

1. Waterfront Hotel

2. AmericInn by Wyndham Prairie du Chien

3. Country Inn & Suites by Radisson, Prairie du Chien

4. Windsor Place Inn

5. Trickling Waters Retreat

6. Quality Inn & Suites Prairie Du Chien

7. AmericInn by Wyndham Boscobel

8. Comfort Inn & Suites Marquette - Prairie du Chien

9. Northwood Inn Prairie Du Chien

10. AmericInn by Wyndham Viroqua

11. Old Towne Motel

12. Microtel Inn & Suites by Wyndham Prairie du Chien

13. Prairie Voyager

14. Fenway House Hotel

15. Tobacco Warehouse Inn

16. MIDWAY MOTEL

17. Hydro-Massage Tub! Wrangler Outlaw Suite! Horses!

18. Scenic Valley Motel

19. American House 1854- Stagecoach Stop Suite, 2 Bedrooms, Kitchenette, Sleeps 6

20. American House 1854- Pocket City Penthouse, 2 Bedrooms, Full Kitchen & Dining

Where to stay near Seneca

Ferryville

Mount Sterling

Harpers Ferry

Lynxville

Gays Mills

Stay near popular attractions around Seneca

Immaculate Conception - Wexford Church

Kickapoo River

Lynxville Park

Lynxville Library

Eastman

Harpers Ferry

Harpers Ferry City Park

Rittenhouse Lake

Top Seneca Hotel Reviews

Log Cabin next to the Mississippi River

Country Inn & Suites by Radisson, Prairie du Chien

Quality Inn & Suites Prairie Du Chien

Hydro-Massage Tub! Wrangler Outlaw Suite! Horses!

Scenic Valley Motel

Northwood Inn Prairie Du Chien

Romantic Get-a-Way!! 1954 Rail Road Caboose!! Relaxing Hot Tub!

AmericInn by Wyndham Prairie du Chien

Log Cabin/ w hot tub, outdoor pool & pool table

More cheap stays in Seneca

SANDS MOTEL

Northwood Inn Prairie Du Chien

Quality Inn & Suites Prairie Du Chien

Microtel Inn & Suites by Wyndham Prairie du Chien

Prairie Voyager

Scenic Valley Motel

Hotels in Seneca with star-rating

Frequently asked questions

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