Beginning of main content
Trip Type
Flight 1
Flight 2
Flight 3
Flight 4
Flight 5

Search 321,000 hotels worldwide.

Get the price guarantee available for your trip.

No Expedia cancellation fee to change or cancel almost any hotel reservation.


Featured San Juan Capistrano Independent Hotels

See all 527 Hotels in San Juan Capistrano
Newport Beach Marriott Hotel and Spa

Newport Beach Marriott Hotel and Spa

900 Newport Center Dr, Newport Beach
4.0 out of 5.0
4.1 out of 5 (355 reviews)
Very nice hotel with a beautiful view of the ocean This wonderful experience began with the help and warmth of the hotel guest service gentleman at th … - 

$179

$179
La Quinta Inn & Suites Irvine Spectrum

La Quinta Inn & Suites Irvine Spectrum

14972 Sand Canyon Ave, Irvine
2.5 out of 5.0
3.3 out of 5 (330 reviews)
The room was comfortable and clean. The only negative thing was the smoking rooms next to ours. - 

$84

$84
La Quinta Inn John Wayne/Orange County Airport

La Quinta Inn John Wayne/Orange County Airport

1515 S Coast Dr, Costa Mesa
2.5 out of 5.0
3.0 out of 5 (474 reviews)
Customer Service I stayed at this Hotel for 3 days and I noticed a small leaking in the bathroom, noting mayor, by t … - 

$61

$61
CW Suites Hotel John Wayne Airport

CW Suites Hotel John Wayne Airport

2701 Hotel Terrace, Santa Ana
3.0 out of 5.0
3.7 out of 5 (172 reviews)
Great place Stayed there for 4 days with my wife. Great shower. Good breakfast. Location is good if you want to … - 

$101

$101
The Resort at Pelican Hill

The Resort at Pelican Hill

22701 Pelican Hill Road S, Newport Coast
5.0 out of 5.0
4.6 out of 5 (250 reviews)
Nice hotel great service I went with 3 sisters for a spevial birthday trip. For the price we really rxpected more. Beautiful … - 

$395

$395
La Quinta Inn & Suites Temecula

La Quinta Inn & Suites Temecula

27330 Jefferson Ave, Temecula
3.0 out of 5.0
4.1 out of 5 (219 reviews)
Close to my son's house and many restaurants. Very clean and nice hotel. Very good breakfasts. Was very comfortable there. Staff was accomadating … - 

$70

$70
Surf And Sand Resort

Surf And Sand Resort

1555 S Coast Hwy, Laguna Beach
4.0 out of 5.0
4.3 out of 5 (267 reviews)
Need a bed The mattresses need to be replaced or upgraded. For the price I spent per night it should have been … - 

$339

$339
Fairmont Newport Beach

Fairmont Newport Beach

4500 Macarthur Blvd, Newport Beach
4.0 out of 5.0
4.1 out of 5 (858 reviews)
Excellent Hotel Stay! This was a lovely resort hotel! The pool was beautiful with relaxing cabanas. The room was clean, c … - 

$131

$131
Radisson Hotel Newport Beach

Radisson Hotel Newport Beach

4545 Macarthur Blvd, Newport Beach
3.5 out of 5.0
3.9 out of 5 (807 reviews)
It's about 15 minutes to the beach The pillows are not very comfortable other than that everything was great. - 

$134

$134
Hyatt Regency Newport Beach

Hyatt Regency Newport Beach

1107 Jamboree Rd, Newport Beach
4.0 out of 5.0
3.7 out of 5 (598 reviews)
Beautiful grounds and a sweet location. The hotel was very lively and Brian McKnight had a show the … - 

$152

$152
Ayres Hotel & Suites Costa Mesa/Newport Beach

Ayres Hotel & Suites Costa Mesa/Newport Beach

325 Bristol Street, Costa Mesa
4.0 out of 5.0
4.4 out of 5 (1,059 reviews)
Bed was comfortable. Not real pleased with the walk in shower. I'm not handicapped or elderly so th … - 

$144

$144
Hotel Irvine

Hotel Irvine

17900 Jamboree Rd, Irvine
4.0 out of 5.0
4.2 out of 5 (554 reviews)
Nice hotel for the price! It was $50 less then the next lowest priced hotel and was certainly much … - 

$118

$118
La Quinta Inn & Suites Orange County-Santa Ana

La Quinta Inn & Suites Orange County-Santa Ana

2721 Hotel Ter, Santa Ana
2.5 out of 5.0
3.6 out of 5 (386 reviews)
Stay there every time I'm in town for business. Always a great experience. - 

$76

$76
Laguna Cliffs Marriott Resort and Spa

Laguna Cliffs Marriott Resort and Spa

25135 Park Lantern, Dana Point
4.0 out of 5.0
4.2 out of 5 (535 reviews)
Great B&B near Joshua Tree National Park My wife and I booked the Jr. suite for three nights in Joshua Tree. When we arrived, we were told w … - 

$209

$209
Irvine Marriott

Irvine Marriott

18000 Von Karman Ave, Irvine
3.5 out of 5.0
4.2 out of 5 (269 reviews)
Very nice hotel Beatiful pool, the room was awesome. Happy to stay here - 

$116

$116
Island Hotel Newport Beach

Island Hotel Newport Beach

690 Newport Center Dr, Newport Beach
4.5 out of 5.0
4.4 out of 5 (505 reviews)
Great place Very nice, clean facility and room, great location, friendly staff... - 

$199

$199
Ramada Costa Mesa/Newport Beach

Ramada Costa Mesa/Newport Beach

1680 Superior Ave I-405, Costa Mesa
3.0 out of 5.0
3.6 out of 5 (715 reviews)
Lots of motels to choose from, but I stay here because it's perfect location for me. Reasonable rat … - 

$99

$99
Newport Beach Marriott Bayview

Newport Beach Marriott Bayview

500 Bayview Cir, Newport Beach
3.5 out of 5.0
4.3 out of 5 (367 reviews)
very convenient location The hotel was very nice and comfortable, area wasn't crowded in September..was very easy and centra … - 

$159

$159
Motel 6 Riverside South

Motel 6 Riverside South

3663 La Sierra Ave, Riverside
2.0 out of 5.0
2.4 out of 5 (78 reviews)
Near restaurants, easy access Comfortable and spacious to park and very pet-friendly - 

$63

$63
Map

Recently booked San Juan Capistrano hotels

Best Western Capistrano Inn
2.5 out of 5.0
Last booking: 3 hours ago
Americas Best Value Laguna Inn & Suites
2.0 out of 5.0
Last booking: 30 hours ago

Independent San Juan Capistrano Hotel Guide

Some globe-trotters choose hotels based on location, but others book by name. And thanks to Expedia you don’t have to pick. It is why we offer such an expansive range of Independent hotels in San Juan Capistrano, California. Known for well-appointed rooms and friendly, personalized service, each of the top Independent San Juan Capistrano hotels guarantees an unparalleled level of comfort and quality.

You’ll find best-in-class amenities like clean rooms and quiet atmospheres, and some San Juan Capistrano Independent locations may even offer extra little benefits and discounts for frequent travelers.