Top 10 Hotels in San Juan Island (from $92) 2026 - Competitive Prices

A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

Upfront pricing
Our total price for your stay includes taxes and fees
Treat yourself
Save 10% or more on over 100,000 hotels worldwide with Member Prices
Learn about One Key
Be picky
Search almost a million properties worldwide

Go beyond your typical stay in San Juan Island

Pet friendly

Hot tub

Pool

Apartment

Condo

Cottage

Family friendly

Waterpark

Check prices for these dates

Tonight

Tomorrow

Next weekend

In two weeks

Our top choices for San Juan Island hotels

A rustic wooden sign with the text "Inn To The Woods" and a moon and stars design.

A four-poster canopy bed with a brown bedspread, multiple decorative pillows, and a floral-patterned bench at the foot of the bed.

A wooden sign with "IN" written on it, a potted plant, and a pathway leading to a building.

A wooden deck with wicker furniture, a table with a glass top, and potted plants.

1. Inn to the Woods B&B

Friday Harbor

Betsy

A wooden cabin interior with a dining table, chairs, and a bench.

A lodge with multiple cabins, a dock, and a surrounding forest.

A marina with boats docked, surrounded by forested hills and a small building complex.

A cozy cabin interior with a large window overlooking a lake, a fireplace, and a comfortable seating area.

2. Snug Harbor Resort

Friday Harbor

Patricia

$229 nightly

$253 total

Oct 18 - Oct 19

Total with taxes and fees

A modern interior with sofas, a table, and hanging plants.

A modern lobby with a reception desk, seating area, and a large window with a view of the sea.

A covered outdoor swimming pool area with a hot tub, benches, and emergency exit signs.

A modern interior with a stone fireplace, hanging lamps, and a sign indicating the property is for sale.

3. Friday Harbor Suites

Friday Harbor

Jennifer

$200 nightly

$221 total

Oct 4 - Oct 5

Total with taxes and fees

Two people relaxing by a fire pit with a view of a harbor and a large ship.

A couple in white bathrobes sitting on a bed with a textured headboard, two wall-mounted lamps, and a decorative wall piece.

A bar area with a large TV screen displaying a landscape, a bookshelf with books and bottles, and leather chairs.

A bar area with shelves of bottles and glasses, a counter with a fruit bowl, and tables with chairs.

4. Friday Harbor House

Friday Harbor

Robert

$439 nightly

$486 total

Oct 6 - Oct 7

Total with taxes and fees

A living room with a sofa, armchairs, a coffee table, and a fireplace.

A waterfront promenade with benches, a gazebo, and a large white boat docked at a pier.

A building with a sign that reads "OFFICE Gift Shop" at the entrance.

A hotel lobby with a reception desk, seating area, and a view of the adjacent room.

5. Earthbox Inn & Spa

Friday Harbor

Amy

$230 nightly

$255 total

Oct 1 - Oct 2

Total with taxes and fees

A motel with a row of rooms, a parking lot, and blooming flowers in the foreground.

A wooden chair and a wooden dresser in a room with a wooden panel wall.

A bathroom with a shower, a towel rack, and a shelf with a towel.

A hallway with an exit sign, a statue, and a Starbucks sign on the wall.

6. The Orca Inn

Friday Harbor

Andrew

$98 nightly

$109 total

Oct 27 - Oct 28

Total with taxes and fees

A serene outdoor seating area with a table and chairs, surrounded by lush greenery and a tree.

A dining table set with plates of food, glasses, and a vase of flowers.

A spacious entryway with a wooden staircase, a patterned rug, and potted plants.

A grassy area with a pond, trees, and a red chair.

7. Trumpeter Inn

Friday Harbor

James

$230 nightly

$254 total

Oct 1 - Oct 2

Total with taxes and fees

A two-story house with a front porch, a picket fence, and a small garden area.

A conservatory with a dining table set for four, surrounded by white chairs, and a lamp on the right.

A cozy room with a wooden ceiling, a bed with a quilt, a sofa with cushions, a table with a board game, and a window with shutters.

A balcony with a hot tub, two chairs, and a table set with plates, glasses, and a bottle.

8. Tucker House Inn

Friday Harbor

ZACHARY

$182 nightly

$202 total

Oct 12 - Oct 13

Total with taxes and fees

A two-story building with a covered porch, surrounded by a variety of flowering plants.

A man seated at a piano with sheet music, surrounded by books and a vase of flowers.

A living room with a grand piano, a fireplace, a sofa, and a chair.

A room with a bed, a TV, a table with chairs, a rug, and a balcony with chairs.

9. Friday Harbor Grand B&B

Friday Harbor

Andrew

$237 nightly

$263 total

Oct 4 - Oct 5

Total with taxes and fees

A building with a covered outdoor area, red doors, and hanging flower baskets.

A hotel room with two beds, a nightstand with a lamp, a vase with flowers, and a window with curtains.

A pool area with a wooden deck, surrounded by trees with pinkish leaves.

A hotel room with a grey armchair, a small round table, a bedside table, a lamp, and a potted plant.

10. Discovery Inn

Friday Harbor

Robert

$155 nightly

$171 total

Oct 12 - Oct 13

Total with taxes and fees

A marina with boats, a cruise ship, and a forested island.

A kitchen with wooden cabinets, a built-in microwave, and a coffee station.

A white building with a balcony, potted plants, and a stone pathway.

A hotel room with a bed, a TV, a painting, a wooden dresser, and a desk with a lamp.

11. Bird Rock Hotel

Friday Harbor

Vanessa

$160 nightly

$177 total

Oct 1 - Oct 2

Total with taxes and fees

A two-story house with a red roof and white exterior, featuring a front porch with red chairs and a small tree.

A spacious living area with a fireplace, patterned furniture, and large windows.

A two-story house with a balcony, a red door, and a view of the mountains.

A house with a red roof, surrounded by lush greenery and mountains in the background.

12. Anacortes Ship Harbor Inn

Anacortes

Traci

$109 nightly

$121 total

Oct 4 - Oct 5

Total with taxes and fees

A wooden pier leading to a building with large windows and a flagpole.

A restaurant with stone walls, wooden tables, and chairs. There are large windows allowing natural light.

A wooden pier leading to a dock with boats, a grocer's shop, and a forested hillside in the background.

A wooden interior with a bench, tables, and a staircase leading to the hotel office.

13. Lopez Islander Resort

Lopez Island

Diane

$179 nightly

$198 total

Oct 4 - Oct 5

Total with taxes and fees

A marina with boats docked in a structured layout, surrounded by water and a distant cityscape.

A hotel with a large building, a pond in front, and trees around.

A restaurant with tables set for dining, large windows offering a view of boats and greenery.

A waterfront hotel with multiple docked boats, a pier, and a view of the surrounding forested area.

14. Roche Harbor Resort

Friday Harbor

Nicco

$250 nightly

$276 total

Oct 12 - Oct 13

Total with taxes and fees

A wooden pier extending over calm water with a clear sky above.

A spacious dining area with wooden tables and chairs, large windows offering views of the outdoors, and a fireplace.

A wooden deck with a glass door leading to a bedroom, a glass table, and a view of a lake with boats.

A bar area with wooden shelves, stools, and a counter.

15. Kingfish at West Sound

Eastsound

Yoav

A room with a sloped ceiling and large windows offering a view of a rural landscape.

A group of people sitting around a campfire at night, with a house in the background.

An outdoor event with people seated at tables under string lights and paper lanterns.

A table with various food items, including a dish with green beans, eggs, and a bowl of sauce.

16. Saturn's Return

Friday Harbor

Margaret

$295 nightly

$325 total

Oct 5 - Oct 6

Total with taxes and fees

An aerial view of a coastal marina with boats docked, surrounded by lush greenery and residential areas.

A cozy cabin interior with a kitchen, dining area, and a fireplace.

A cozy room with a fireplace, a television, a dining area, and a sofa with a view of greenery.

A wooden porch with two cushioned chairs, a hanging flower pot, and a sign thanking the carpenter family.

17. Deer Harbor Inn

Deer Harbor

Nemo

$203 nightly

$224 total

Oct 16 - Oct 17

Total with taxes and fees

A rustic cabin with a wooden exterior, a front door, and a pathway leading to it, surrounded by large rocks and trees.

A wooden cabin with a porch, surrounded by trees and pine needles.

A kitchen with wooden cabinets, a microwave, a hanging light fixture, a fireplace, and a window with a view of trees.

18. Lopez Farm Cottages & Tent Camping

Lopez Island

Taylor

A large, two-story house with a well-maintained lawn and a brick pathway leading to the front door.

A living room with a fireplace, leather sofa, and a large painting above the fireplace.

A garden with pink roses and purple flowers, a white fence, and a pergola.

A wooden deck with a round table and chairs, a sofa, and a view of a sunset over a landscape.

19. The Edenwild Boutique Inn

Lopez Island

Frances

$136 nightly

$150 total

Sep 27 - Sep 28

Total with taxes and fees

A wooden front door with glass panels, flanked by two large flower pots with pink flowers, and a dark woven mat at the entrance.

A building with a tower featuring the word "Inn" on its facade, surrounded by greenery and a brick structure.

A hotel room with two beds, each with white bedding, two bedside lamps, and framed pictures on the wall.

A cozy reading nook with a round table, a chair, and a potted plant.

20. Coachman Inn & Suites

Oak Harbor

James

$130 nightly

$145 total

Oct 6 - Oct 7

Total with taxes and fees

View all properties

Save an average of 15% on thousands of hotels when you're signed in

Stay near popular San Juan Island attractions

A marina with boats docked, surrounded by forested hills and a town with buildings.

Roche Harbor Marina

9.4/10 (332 reviews)

Explore the waterfront in Roche Harbor with a trip to Roche Harbor Marina. While you're in the area, stroll along the seaside.

See properties

A lighthouse on a rocky coastline with the ocean in the foreground.

Lime Kiln Point State Park

9.6/10 (317 reviews)

Also known as Whale Watch Park, this diving site is one of the best places in the world to view wild orca pods from the shore.

See properties

A lighthouse on a rocky cliff by the sea.

San Juan Island National Historic Park

9.4/10 (184 reviews)

You can learn about the history of Friday Harbor with a visit to San Juan Island National Historic Park. While you're in the area, stroll along the waterfront.

See properties

People preparing kayaks on a riverbank with a small office and a red-roofed building in the background.

San Juan County Park

9.0/10 (87 reviews)

A hotspot for kayakers, this scenic and diverse campsite is the perfect retreat for both those wanting to relax and adventurists.

See properties

A landscaped garden with geometric hedges, a flagpole with a flag, and a body of water in the background.

English Camp

9.2/10 (153 reviews)

More than 150 years ago, the British Army prepared for battle on this site during the Pig War. Now, it’s a thought-provoking homage to the islands’ dramatic history.

See properties

Whale Museum

8.8/10 (89 reviews)

You can spend an afternoon browsing the exhibits at Whale Museum during your trip to Friday Harbor. While you're in the area, stroll along the waterfront.

See properties

San Juan Islands Museum of Art

8.4/10 (22 reviews)

You can spend an afternoon exploring the galleries in San Juan Islands Museum of Art during your travels in Friday Harbor. While you're in the area, stroll along the waterfront.

See properties

San Juan Islands Sculpture Park

8.8/10 (144 reviews)

Explore the great outdoors at San Juan Islands Sculpture Park, a lovely green space in Roche Harbor. While you're in the area, stroll along the seaside.

See properties

Learn more about San Juan Island

San Juan Island entices visitors with its quaint harbor towns, forest trails and the chance to see a range of wildlife, including endangered orcas.

See all hotels in San Juan Island

A marina with numerous boats docked, a wooden pier, and a forested hill in the background.

Top San Juan Island Hotel Reviews

The Marina Inn

10/10 Excellent

"Staff friendly and helpful. Rooms exceptionally clean. 6AM continental breakfast for early risers."

Anacortes Inn

10/10 Excellent

"Great spot in one of the coolest downs in the PNW"

The Orca Inn

8/10 Good

"Great place in the perfect location while attending a nearby wedding. In my process range, no complaints."

Discovery Inn

10/10 Excellent

"Beautiful room, excellent place"

Inn to the Woods B&B

10/10 Excellent

"It's a very charming property. My bed was very comfortable, and I had a private hot tub on the patio with a view of Egg Lake! Breakfast was delicious and thoughtful. There are two adorable dogs on the property which made me very happy!"

Best Western Plus Oak Harbor Hotel & Conference Center

10/10 Excellent

"We were traveling with dogs and given a room with a slider that opened to a nice park to walk the dogs. I wish the park was fenced so the dogs could run around a bit. The room was beautifully maintained, sunny and cheerful. There is an excellent Chinese restaurant right beside the hotel. We walked over and had a wonderful meal. The staff was friendly and accommodating. The hot tub was excellent, but the pool was too small. There was a ramp into the pool making access very easy. I would definitely stay here again."

Westcott Bay Beachfront Home - Hot Tub with a view of the Bay

10/10 Excellent

"Beautiful spot! Can't wait to visit again!"

Trumpeter Inn

10/10 Excellent

"A magical stay with amazing breakfast each day and cute farm animals to visit. Loved everything about it 💗"

Waterfront! Hot Tub! Dog Friendly! (TSB)

10/10 Excellent

"Rating Details: The property manager was very helpful. The vacation rental was spotless. I was very happy with the location. I was very satisfied with the condition of the vacation rental. Overall, I recommend this vacation rental. Reviewer Comments: Booked an off-season getaway and had a very pleasant experience. Really enjoyed being able to slow down and watch the winter rain roll in over the water. The property was clean, well-maintained, and comfortable, and the property management company was nicely responsive. Would highly recommend!"

More cheap stays in San Juan Island

Anacortes Inn

3006 Commercial Ave Anacortes WA

$81 nightly

$92 total

Oct 25 - Oct 26

Total with taxes and fees

8.8/10 Excellent! (619 reviews)

Auld Holland Inn

33575 State Route 20 Oak Harbor WA

$90 nightly

$100 total

Oct 5 - Oct 6

Total with taxes and fees

The Orca Inn

770 Mullis St Friday Harbor WA

$98 nightly

$109 total

Oct 27 - Oct 28

Total with taxes and fees

8.2/10 Very Good! (161 reviews)

Coachman Inn & Suites

32959 Highway 20 Oak Harbor WA

$130 nightly

$145 total

Oct 6 - Oct 7

Total with taxes and fees

Best Western Plus Oak Harbor Hotel & Conference Center

33175 State Route 20 Oak Harbor WA

$145 nightly

$162 total

Oct 4 - Oct 5

Total with taxes and fees

9/10 Wonderful! (1,002 reviews)

The Marina Inn

3300 Commercial Ave Anacortes WA

$155 nightly

$174 total

Sep 27 - Sep 28

Total with taxes and fees

9.6/10 Exceptional! (1,003 reviews)

Hotels in San Juan Island with star-rating

Find out more about San Juan Island

Top reasons to visit San Juan Island

Outdoor Adventures: Enjoy thrilling activities like hiking, kayaking, and whale watching amidst stunning natural beauty.
Charming Neighborhoods: Explore picturesque towns and the delightful fairy houses scattered throughout the island.
Historic Sites: Visit significant landmarks that showcase the rich history and culture of San Juan Island.
Relaxing Accommodations: Choose from cozy bed & breakfasts to luxurious resorts for a comfortable stay.
Scenic Waterfront Views: Experience breathtaking vistas and romantic excursions along the island’s beautiful shores.

Find great hotels near San Juan Island

Discover the charm of San Juan Island, where a variety of accommodation options await you, from cozy bed & breakfasts to luxurious resorts. Whether you're seeking adventure, a family-friendly experience, or a pet-friendly getaway, you'll find the perfect lodging to suit your needs. Explore the beauty of the island while enjoying the comforts of well-appointed hotels that cater to every traveler. Your unforgettable vacation in the San Juan Islands starts here.

Friday Harbor Suites: Friday Harbor Suites is a budget-friendly accommodation option with a guest rating of 8.4, making it ideal for adventurous travelers and business visitors alike. Located 3 miles from San Juan Island, this hotel offers a convenient base for exploring the area. Guests can enjoy a variety of adventure sports both onsite and nearby, including boat tours, kayaking, and hiking. The comfortable rooms and welcoming atmosphere provide an excellent setting for both relaxation and adventure during your stay.
Earthbox Inn & Spa: With a guest rating of 8.8, Earthbox Inn & Spa is a pet-friendly hotel that combines relaxation and adventure seamlessly. Situated 3 miles from San Juan Island, this property features a full-service spa and a lovely pool area to unwind after a day of exploring. Guests can partake in activities like mountain climbing, rafting, and horseback riding. Moreover, the inn welcomes pets with amenities like a dog exercise area and water bowls, ensuring the whole family can enjoy a retreat together.
Inn to the Woods B&B: Rated an impressive 9.8, Inn to the Woods B&B is a charming bed and breakfast located just 1 mile from San Juan Island. This cozy lodging option is perfect for travelers seeking a pet-friendly environment with a touch of adventure. Guests can engage in activities such as snorkeling, ziplining, and canoeing nearby. The warm hospitality and intimate setting create a perfect retreat for those looking to connect with nature and unwind in a peaceful atmosphere.

Where to stay near San Juan Island

San Juan Island offers a captivating blend of outdoor adventures and serene scenery, making it an ideal island getaway. Explore the breathtaking waterfront views, indulge in romantic excursions, or discover the charming neighborhoods of nearby Orcas Island. Whether you're hiking, kayaking, or simply soaking in the peaceful atmosphere, San Juan Island and its surrounding areas promise unforgettable experiences for every traveler seeking relaxation and adventure.

Friday Harbor: Nestled on San Juan Island, Friday Harbor is a charming city that serves as the gateway to the San Juan Islands. Known for its scenic beauty and outdoor adventures, this vibrant town experiences its busiest seasons from June to August. Visitors flock here to enjoy activities like hiking, kayaking, and whale watching. Highlights include the stunning views at the nearby national parks and recreational areas, making it a perfect spot for nature lovers. With a golf course and access to various water sports, Friday Harbor offers a well-rounded travel experience.
San Juan Islands: This picturesque archipelago, located just 7 miles from San Juan Island, is renowned for its breathtaking scenery and vibrant outdoor activities. The islands see a peak in visitors from May to July, drawn by the allure of kayaking, biking, and exploring the rich wildlife. With national parks and beautiful lakes nearby, the San Juan Islands provide endless opportunities for adventure. Whether you're hiking scenic trails or enjoying a relaxing day at the beach, the islands promise a memorable escape into nature.
Orcas Island: Situated 9 miles from San Juan Island, Orcas Island is a natural paradise that captivates visitors with its lush landscapes and outdoor experiences. This island sees a surge of travelers from June to August, all eager to explore its hiking trails, golf courses, and serene lakes. The local charm of Orcas Island is complemented by its proximity to national parks, offering ample opportunities for adventure and relaxation. Whether you're looking to unwind in nature or engage in thrilling outdoor activities, Orcas Island is a must-visit destination.

Things to do in San Juan Island

San Juan Island offers an incredible outdoor adventure experience, perfect for those seeking scenic beauty and activities. Visitors can enjoy wildlife tours and thrilling whale watching, while also exploring charming fairy houses. For relaxation, indulge in spa services at local resorts. With a blend of recreation and natural wonders, San Juan Island is an ideal destination for a memorable vacation.

Shopping

In the heart of Friday Harbor, you’ll discover unique shops like The Whale Museum Store, offering marine-themed gifts, and the San Juan Island Farmers Market, where local artisans showcase handmade crafts and fresh produce. Don’t miss the charming boutiques along Spring Street for delightful souvenirs.

Recreation

Explore the tranquil Serenity Spa, where you can indulge in rejuvenating massages and holistic treatments surrounded by nature. For outdoor recreation, hike the scenic trails of San Juan Island National Historical Park, offering picturesque views and a chance to connect with the island's natural beauty.

Adventure

Explore the stunning landscapes of San Juan Island through kayaking in the calm waters, where you can spot seals and orcas. Hike up Mount Young for panoramic views, or bike along scenic trails to discover charming farms and coastal vistas. Adventure awaits at every turn.

Nightlife

Explore the vibrant nightlife at The Duck Soup Inn for a cozy dinner and cocktails. For a lively evening, visit The Rumor Mill to enjoy live music and dance the night away with locals while sipping on crafted cocktails.

*Distances are measured in a straight line; actual driving distances may vary depending on the route.

Booking tips and Expedia advantages for San Juan Island

The most and least expensive months on average to stay in a hotel: The cheapest months to stay around San Juan Island are December to February, where the prices are slightly lower. This is in comparison to June to August, where prices are slightly higher.
The best time to book a hotel: Booking a hotel around San Juan Island about 1 month out from when you are planning to stay is usually when prices are lowest. If you're a little more spontaneous, you could also peruse Expedia's last minute deals for hotels, look out for the green banner below the price, as this indicates a cheaper deal.
The most and least expensive days on average to stay in a hotel: The least expensive day to stay around San Juan Island is Tuesday. The most expensive day to stay around San Juan Island is Friday.
Find cheap hotels on Expedia: Utilize Expedia's search tool to refine your preferences, such as your budget, desired location, and preferred hotel type. For instance, selecting the Eco-certified option will showcase sustainable and environmentally-friendly hotels currently available. To find the best prices and deals, simply sort the price filter from lowest to highest.
Consider bundling your trip: You can save money by combining your hotel stay on San Juan Island with your flights and activities through an Expedia package deal.

Find the best attractions near San Juan Island

San Juan Island offers a fantastic blend of outdoor adventures and scenic beauty, perfect for vacationers. Explore historic sites, wander through picturesque national and state parks, or enjoy the vibrant marina. Whether you're hiking, kayaking, or simply soaking in the stunning landscapes, the island caters to travelers seeking an unforgettable experience in nature and adventure.

Roche Harbor Marina: Experience the charm of Roche Harbor Marina, a vibrant hub for adventure and relaxation. Located 5 miles from San Juan Island, this marina offers stunning views, beach access, and a variety of outdoor activities like kayaking and paddleboarding.
Lime Kiln Point State Park: Just 4 miles away, Lime Kiln Point State Park is renowned for its breathtaking scenery and outdoor adventures. As one of the best spots for whale watching, you can enjoy scenic trails and picnic areas with panoramic views of the Salish Sea.
San Juan Island National Historic Park: Located 7 miles from the island, this historic site immerses you in the rich culture and history of the region. Explore well-preserved landscapes, trails, and interpretive exhibits that tell the story of the area’s past.

Best time to go to San Juan Island

The best time to visit San Juan Island is dependent on what kind of holiday you are seeking. August is its hottest month on average. At this time, visitor numbers are moderately high and weather is sunny with no rain. December and February are its coolest month on average. At the time of February, visitor numbers are moderately low and weather is mostly cloudy.

Calendar Month	Temperature	Precipitation	Cloudiness	Occupancy	Pricing
January	43.3°F (6.3°C)	Light Rain	Mostly Cloudy	Moderately Low	Slightly Low
February	42.4°F (5.8°C)	Light Rain	Mostly Cloudy	Moderately Low	Slightly Low
March	45.1°F (7.3°C)	Light Rain	Mostly Cloudy	Average	Average
April	48.6°F (9.2°C)	Light Rain	Mostly Sunny	Average	Average
May	53.6°F (12.0°C)	No Rain	Mostly Sunny	Average	Average
June	57.4°F (14.1°C)	No Rain	Mostly Sunny	Average	Slightly High
July	60.6°F (15.9°C)	No Rain	Sunny	Moderately High	Slightly High
August	61.2°F (16.2°C)	No Rain	Sunny	Moderately High	Slightly High
September	58.1°F (14.5°C)	Light Rain	Mostly Sunny	Moderately High	Average
October	52.7°F (11.5°C)	Light Rain	Mostly Sunny	Average	Average
November	47.1°F (8.4°C)	Light Rain	Mostly Cloudy	Average	Average
December	42.4°F (5.8°C)	Light Rain	Mostly Cloudy	Moderately Low	Slightly Low

The nearest major airports for your trip to San Juan Island

Traveling to San Juan Island, Washington, is convenient with three major airports nearby. SEAttle-Tacoma International Airport (SEA) is 85 miles away, with luxury options like the Fairmont Olympic Hotel and Four Seasons Hotel Seattle, both 11 miles from the airport. Vancouver International Airport (YVR) is 45 miles away, offering the Versante Hotel just 2 miles from the airport and JW Marriott Parq Vancouver 6 miles away. Lastly, Victoria International Airport (YYJ) is 17 miles from San Juan Island, with the Brentwood Bay Resort & Spa 5 miles away and offering airport shuttle services. These airports provide excellent access to San Juan Island for a memorable getaway.

Explore a world of travel with Expedia

Things to do in Friday Harbor

Find hotels in San Juan Island, WA from $92

Upfront pricing

Treat yourself

Be picky

Go beyond your typical stay in San Juan Island

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for San Juan Island hotels

1. Inn to the Woods B&B

2. Snug Harbor Resort

3. Friday Harbor Suites

4. Friday Harbor House

5. Earthbox Inn & Spa

6. The Orca Inn

7. Trumpeter Inn

8. Tucker House Inn

9. Friday Harbor Grand B&B

10. Discovery Inn

11. Bird Rock Hotel

12. Anacortes Ship Harbor Inn

13. Lopez Islander Resort

14. Roche Harbor Resort

15. Kingfish at West Sound

16. Saturn's Return

17. Deer Harbor Inn

18. Lopez Farm Cottages & Tent Camping

19. The Edenwild Boutique Inn

20. Coachman Inn & Suites

Stay near popular San Juan Island attractions

Roche Harbor Marina

Lime Kiln Point State Park

San Juan Island National Historic Park

San Juan County Park

English Camp

Whale Museum

San Juan Islands Museum of Art

San Juan Islands Sculpture Park

Learn more about San Juan Island

Top San Juan Island Hotel Reviews

The Marina Inn

Anacortes Inn

The Orca Inn

Discovery Inn

Inn to the Woods B&B

Best Western Plus Oak Harbor Hotel & Conference Center

Westcott Bay Beachfront Home - Hot Tub with a view of the Bay

Trumpeter Inn

Waterfront! Hot Tub! Dog Friendly! (TSB)

More cheap stays in San Juan Island

Anacortes Inn

Auld Holland Inn

The Orca Inn

Coachman Inn & Suites

Best Western Plus Oak Harbor Hotel & Conference Center

The Marina Inn

Hotels in San Juan Island with star-rating

Find out more about San Juan Island

Top reasons to visit San Juan Island

Find great hotels near San Juan Island

Where to stay near San Juan Island

Things to do in San Juan Island

Booking tips and Expedia advantages for San Juan Island

Find the best attractions near San Juan Island

Best time to go to San Juan Island

The nearest major airports for your trip to San Juan Island

Explore a world of travel with Expedia

Go further with the Expedia app