Quiet Resorts & Hotels in Japan from $54

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Our top choices for Japan secluded hotels

Annex Turtle HOTORI-AN

Annex Turtle HOTORI-AN
3.0 star property
Nikko
8.8 out of 10, Excellent, (161 reviews)
"Very comfortable stay on the futon - it was lovely to hear the waterfalls from our room. Location was lovely - bit of a walk from the main town of Nikko, but it was fine for us! The staff were charming and so helpful."
United Kingdom
Robyn
$107 nightly
The price is $120
Mar 8 - Mar 9
Annex Turtle HOTORI-AN

Hotel Graphy Nezu

Hotel Graphy Nezu
3.0 star property
Taito
8.6 out of 10, Excellent, (1,004 reviews)
"Very comfortable room lovely and clean. "
Australia
Joni
$61 nightly
The price is $67
Mar 16 - Mar 17
Hotel Graphy Nezu

Japanese Inn Yoshimizu

Japanese Inn Yoshimizu
3.0 star property
Higashiyama Ward
9.4 out of 10, Exceptional, (238 reviews)
"豊かな自然の中にお宿があり、内観は木の温もりや安らぐ和室となっていて、心安らぐ空間でした。 スタッフの方々がとにかく温かく、お心遣いをいただき、昔の日本の文化やおもてなしを味わいました。ありがとうございました。 また是非伺える日を楽しみにしています!"
Japan
Akiko
Japanese Inn Yoshimizu

Hotel Nikko Narita

Hotel Nikko Narita
4.0 star property
Torika
9.2 out of 10, Wonderful, (4,666 reviews)
"Great hotel"
United States
Dirsia Vergara
$78 nightly
The price is $85
Mar 8 - Mar 9
Hotel Nikko Narita

Villa Sanjo Muromachi Kyoto

Villa Sanjo Muromachi Kyoto
4.0 star property
Downtown Kyoto
9.6 out of 10, Exceptional, (292 reviews)
"This is a small hotel with only 12 rooms so it felt very comfortable and private. Excellent rooms and service."
United States
Jenny
$88 nightly
The price is $97
Mar 9 - Mar 10
Villa Sanjo Muromachi Kyoto

Hotel New Otani Tokyo The Main

Hotel New Otani Tokyo The Main
4.5 star property
Chiyoda
9.4 out of 10, Exceptional, (1,201 reviews)
"Staff very Courtesies, nice rooms, nice baths, very well located"
United States
CELIAR
$362 nightly
The price is $398
Mar 15 - Mar 16
Hotel New Otani Tokyo The Main

Shinjuku Granbell Hotel

Shinjuku Granbell Hotel
4.0 star property
Shinjuku
8.6 out of 10, Excellent, (1,903 reviews)
"Very clean, nice view from restaurant, food (breakfast)"
United States
Max
$104 nightly
The price is $114
Mar 9 - Mar 10
Shinjuku Granbell Hotel

ART HOTEL NARITA

ART HOTEL NARITA
3.0 star property
Kosuge
8.0 out of 10, Very Good, (1,924 reviews)
"Very comfortable rooms "
Canada
Caroline
$51 nightly
The price is $58
Mar 8 - Mar 9
ART HOTEL NARITA

Hotel Nikko Alivila

Hotel Nikko Alivila
4.5 star property
Yomitan
9.2 out of 10, Wonderful, (1,012 reviews)
"Beautiful and peaceful stay. Lots to do with a family as well."
United States
Pia Nicole
$150 nightly
The price is $165
Apr 6 - Apr 7
Hotel Nikko Alivila

Hotel Gran Ms Kyoto

Hotel Gran Ms Kyoto
3.0 star property
Downtown Kyoto
9.0 out of 10, Wonderful, (1,006 reviews)
"Great staff, clean rooms, great lication"
Canada
May
$49 nightly
The price is $54
Mar 16 - Mar 17
Hotel Gran Ms Kyoto
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

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Frequently asked questions

How much do secluded hotels in Japan cost?
Secluded hotels in Japan cost between $54 and $398 per night. When you're ready to get away, Expedia will help you find a peaceful stay that won't stretch the budget.This price was available on Expedia within the past 7 days, for a hotel booking with a check-in date within the next year. Prices reflect current offers and availability is subject to change. Additional terms may apply.
How many secluded hotels are there in Japan?
Take your pick of 104 secluded hotels in Japan. Whether you'd like to get away from it all or just unwind someplace a little quieter, Expedia can help you secure the perfect digs.
Are there any family-friendly secluded hotels in Japan?
You can book secluded family-friendly hotels in destinations across Japan, including Tokyo. Mimaru Tokyo Hatchobori is a traveler favorite in this city. It has a 3-stars rating and amenities including WiFi and laundry facilities. Alternatively, find moments of zen with your group at Oakwood Premier Tokyo. Offering laundry facilities, an oven and more, this 4.5-stars property in Tokyo will make your family feel relaxed and welcome. You'll find lots of awesome things to do with your team in Tokyo. Tokyo Skytree and Shibuya Crossing offer a great day out.
Why book your secluded hotel in Japan with Expedia?
Expedia has unbeatable deals on secluded hotels in Japan. But our low prices are just for starters. You'll find a good range of accommodations available and useful filters that make it a breeze to find your perfect fit. What's more, you can join Expedia Rewards for free and get access to even more savings and discounts.
How can I find cheap secluded hotels in Japan?
With Expedia's user-friendly filter tool, finding a cheap secluded hotel in Japan is a walk in the park. To find properties that'll make your wallet smile, tailor your search results by star rating, amenities and budget. Our "neighborhood" filter also makes it easy to look for peaceful hideaways in quieter areas.
What is there to do near my secluded hotel in Japan?
There are many things to keep you on the go in Japan. If you're visiting Tokyo, check out Tokyo Imperial Palace, Akihabara Electric Town and KidZania Tokyo. Basing yourself in Kyoto? Kyoto Imperial Palace, Nijō Castle and Kyoto Aquarium are top attractions here.