Find hotels near Mission Bay, San Diego from $120

Most hotels are fully refundable. Because flexibility matters.

Save an average of 15% on thousands of hotels with Expedia Rewards

Search over 2.9 million properties and 550 airlines worldwide.

Compare 5,610 hotels close to Mission Bay with room rates, reviews, and availability. Most hotels are fully refundable.

0.3 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$299

per night

Jun 5 - Jun 6

8/10 Very Good! (992 reviews)

"The front desk (Anna) and staff made our trip exceptionally easy. Everyone was eager to help us and make sure our stay was flawless."

Reviewed on May 29, 2023

0.8 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$199

per night

Jun 5 - Jun 6

8.4/10 Very Good! (2,606 reviews)

"This was our first time at The Dana, and we really enjoyed our stay. We loved the tropical plants, the style and cleanliness of our room, and the courteousness of the staff! Hope to stay again sometime."

Reviewed on Jun 4, 2023

2.1 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$260

per night

Jun 8 - Jun 9

8.2/10 Very Good! (1,262 reviews)

"Good place"

Reviewed on Jun 1, 2023

Save an average of 15% on thousands of hotels when you're signed in

Sign in

6.6 mi from Mission Bay

$188

per night

Jun 11 - Jun 12

7.8/10 Good! (1,177 reviews)

"Nice hotel. Only stayed 1 night not sure if I’d spend 2/3 more days there though. Lobby is lovely, but the rooms need a refresh."

Reviewed on Jun 4, 2023

Comfort Inn & Suites San Diego - Zoo SeaWorld Area

1.3 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$154

per night

Jun 6 - Jun 7

6.8/10 (61 reviews)

"It’s a very nice structure hotel. The room looks really nice too."

Reviewed on May 29, 2023

5.3 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$277

per night

Jun 6 - Jun 7

8.8/10 Excellent! (1,068 reviews)

"We enjoyed our room and the customer service. The restaurant was excellent as well."

Reviewed on Jun 1, 2023

8.6 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$237

per night

Jun 18 - Jun 19

7.8/10 Good! (1,003 reviews)

"Like the area. Request more towels and they didn’t deliver them."

Reviewed on Jun 1, 2023

Embassy Suites by Hilton San Diego La Jolla

6.7 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$230

per night

Jun 8 - Jun 9

8.8/10 Excellent! (1,242 reviews)

"Everything about the stay was amazing. Two tiny hiccups but not worth giving this stay a lower rating. Thay had two complimentary drinks for the adults in the group. Free delicious breakfast, the cleaning crew at breakfast were so nice, humble, and accommodating. The pool hours are so convenient. ..."

Reviewed on May 30, 2023

8.4 mi from Mission Bay

Fully refundable

$249

per night

Jun 5 - Jun 6

9/10 Wonderful! (1,182 reviews)

"Enjoyed our stay!"

Reviewed on Jun 2, 2023

4 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$120

per night

Jun 7 - Jun 8

8.2/10 Very Good! (1,004 reviews)

Good value, safe, clean, and friendly.

"The staff here was extremely helpful and friendly. The check in and out were both simple and the front desk staff couldn't have been nicer. The hotel is older, but clean and well maintained. The water pressure was great and the temperature was terrific too. The place was quiet and in a great location ..."

Reviewed on Jun 4, 2023

Residence Inn by Marriott San Diego La Jolla

6.3 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$279

per night

Jun 8 - Jun 9

8.6/10 Excellent! (1,000 reviews)

"Great"

Reviewed on May 8, 2023

Fairfield Inn & Suites by Marriott San Diego Pacific Beach

1.7 mi from Mission Bay

$202

per night

Jun 18 - Jun 19

8.8/10 Excellent! (362 reviews)

A very nice stay

"Stayed at this property to attend Grand Daughters College graduation. We were here for only one night. The rooms were clean and we were given early check-in. The hotel offers a free breakfast which included eggs, rolls, waffles, yogurt, bagels, juices, and of course coffee. The location is good, ..."

Reviewed on May 29, 2023

4.9 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$369

per night

Jun 5 - Jun 6

8.6/10 Excellent! (1,001 reviews)

"Impeccable service and beautiful hotel. We’ll be back."

Reviewed on May 30, 2023

Holiday Inn Express San Diego Airport - Old Town, an IHG Hotel

2 mi from Mission Bay

Fully refundable

$200

per night

Jun 21 - Jun 22

8.6/10 Excellent! (1,213 reviews)

"The room looked exactly like pictures. Check in /checkout was very easy and quick. Definitely enjoyed the stay! 10/10"

Reviewed on May 28, 2023

1.2 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$300

per night

Jun 12 - Jun 13

9/10 Wonderful! (1,002 reviews)

"Check in/out was easy. Staff were friendly and helpful. Valet was convenient and fast. Hotel is steps away from beach and shops which helped us maximise our time due to not having to drive everywhere. Breakfast had various options. It was a quiet stay and I would stay again in the future."

Reviewed on Jun 2, 2023

3.6 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$174

per night

Jun 11 - Jun 12

8.6/10 Excellent! (1,152 reviews)

"As with most hotels, it is showing its age. Although patterned, the carpet is stained, the bathroom has some defective tiles and wonky grout and a very small vanity and sink. The A/C was good but like all hotels now, they use the weird little squashy pillows on a queen sized bed. I hate them."

Reviewed on May 24, 2023

Residence Inn by Marriott San Diego Sorrento Mesa/Sorrento Valley

8.6 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$269

per night

Jun 11 - Jun 12

8.8/10 Excellent! (461 reviews)

"The staff are friendly and kind"

Reviewed on May 8, 2023

1.6 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$134

per night

Jun 12 - Jun 13

7.6/10 Good! (1,004 reviews)

"We have stayed here a couple times. The staff is always friendly & welcoming. Parking is tight but they have options for parking if you arrive later in the night. We will definitely continue to stay here."

Reviewed on Jun 1, 2023

Fairfield Inn & Suites San Diego Old Town

2 mi from Mission Bay

Fully refundableReserve now, pay when you stay

$183

per night

Jun 11 - Jun 12

8.4/10 Very Good! (506 reviews)

"Great place to stay"

Reviewed on Jun 3, 2023

1.4 mi from Mission Bay

$349

per night

Jun 21 - Jun 22

9.4/10 Exceptional! (1,066 reviews)

"This property was great. Our room was spacious, clean and had incredible views. The staff were helpful and kind."

Reviewed on May 28, 2023

Don't see what you're looking for?

See all available properties in Mission Bay

View all properties

Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Mission Bay hotels information

Number of reviews	20,364
Accommodation	5,610 hotels
Lowest Price	$120
Highest Price	$369

Hotels near Other San Diego Attractions

North Cove Beach
Why not spend a lazy afternoon at North Cove Beach during your trip to San Diego? Experience the entertainment choices and acclaimed art scene in this walkable area.
See properties
North Cove Beach
SeaWorld
4.5/5(2,421 reviews)
Animal interaction, entertaining rides and informative exhibits are all on offer at this family favorite destination.
See properties
SeaWorld
Mission Bay Park
4.5/5(139 reviews)
Enjoy the beautiful sunsets and explore Mission Bay Park, a lovely green space in San Diego. Discover the top-notch restaurants in this walkable area, or seek out the surfing spots.
See properties
Mission Bay Park
De Anza Cove Park
Explore the great outdoors at De Anza Cove Park, a lovely green space in San Diego. Experience the fascinating museums and acclaimed art scene in this walkable area.
See properties
De Anza Cove Park
Belmont Park
4.5/5(725 reviews)
The amusement park at Mission Beach offers lots of old-fashioned family fun, plus a range of newer thrill rides and attractions.
See properties
Belmont Park
Bay City Brewing Co.
4.5/5(3 reviews)
You can take time to visit Bay City Brewing Co. during your travels to San Diego. Discover the beautiful sunsets and top-notch restaurants in this walkable area.
See properties
Bay City Brewing Co.

Frequently asked questions

What's the area like around Mission Bay?

Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, check out the 32 hotels and other accommodations you'll find within a mile.

Where is the best place to stay near Mission Bay?

Paradise Point Resort & Spa is one of the top choices for your stay based on our traveler data, and this 4-star aparthotel offers a marina and 5 outdoor pools. It's located just a short 0.7 mi (1.2 km) from Mission Bay. Another good option is San Diego Mission Bay Resort, located just 1 mi (1.6 km) away.

How many hotels can I expect to find close to Mission Bay?

Expedia has 32 hotels and other accommodations within a mile from Mission Bay.

If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?

Yes! You'll find that most hotel bookings are fully refundable provided that you cancel before the hotel’s cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If your reservation is non-refundable, you may still be able to cancel and be given a refund within 24 hours of booking. Enter your dates, click on "Search", then filter by "fully refundable" to review the top deals on offer near Mission Bay.

Where can I learn more about changing or cancelling my trip in the area near Mission Bay?

For more details about picking new dates or cancelling your stay near Mission Bay, head over to our customer service page.

What can I see and do near Mission Bay?

Study the collections at Maritime Museum of San Diego, Junipero Serra Museum, or McCoy Museum House. Casa de Machado y Stewart, Casa de Estudillo, and Mason Street School are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, Cygnet Theater Company, and Red Spade Theater.