Beginning of main content

Shinjuku Hotel Rooms at the Independent

Search Flights

Trip Type
Flight 1
Flight 2
Flight 3
Flight 4
Flight 5

Shinjuku Hotels

Search Flight + Hotel

Search 321,000 hotels worldwide.

Get the price guarantee available for your trip.

No Expedia cancellation fee to change or cancel almost any hotel reservation.


Featured Shinjuku Independent Hotels

See all 1,053 Hotels in Shinjuku
Hotel Sunroute Plaza Shinjuku

Hotel Sunroute Plaza Shinjuku

2-3-1 Yoyogi, Tokyo
3.5 out of 5.0
4.4 out of 5 (2,348 reviews)
Nice, affordable hotel in good area We felt comfortable staying at Hotel Sunroute Plaza Shinjuku. It is in a good location and has good … - 

$134

$134
HUNDRED STAY Tokyo Shinjuku

HUNDRED STAY Tokyo Shinjuku

2-27-7 Hyakunincho, Shinjuku-ku, Tokyo
4.0 out of 5.0
4.1 out of 5 (192 reviews)
Wonderful Hotel to Explore Tokyo Our family of 4 visited Tokyo for the first time and Hundred Stay was perfect for us. We reserved a … - 

$147

$147
Ryokan Takemine

Ryokan Takemine

1-1-3 Nakaochiai, Tokyo
3.5 out of 5.0
4.7 out of 5 (25 reviews)
Absolutely beautiful hotel This place is so quite and relaxing. In traditional Japanese style, I felt like I was in a world aw … - 

$153

$153
Shinjuku Granbell Hotel

Shinjuku Granbell Hotel

2-14-5 Kabuki-cho, Tokyo
4.0 out of 5.0
4.1 out of 5 (922 reviews)
nice hotel on good location The room is neat but small,. Nice view of the city. The bathroom is poorly designed, it is inconven … - 

$129

$129
Hotel Rose Garden Shinjuku

Hotel Rose Garden Shinjuku

8-1-3 Nishi-shinjuku, Tokyo
3.0 out of 5.0
4.2 out of 5 (82 reviews)
Close to shinjuku area This hotel was clean, simple, no frills - but no problems :) - 

$121

$121
1/3rd Residence Serviced Apartments Shinjuku

1/3rd Residence Serviced Apartments Shinjuku

9-9 Aizumi-chou, Tokyo
3.5 out of 5.0
4.5 out of 5 (2 reviews)
Very nice! The hotel is close from subway, supermarket and many good restaurants. It's located in the middle o … - 
Hotel Sunroute Higashi Shinjuku

Hotel Sunroute Higashi Shinjuku

7-27-9 Shinjuku Shinjuku-ku, Tokyo
3.0 out of 5.0
4.2 out of 5 (502 reviews)
Comfortable. Close to shopping and dining. Reasonable rates. Couteous and helpful front desk. Clean … - 

$72

$72
Century Southern Tower Hotel

Century Southern Tower Hotel

2-2-1 Yoyogi, Tokyo
4.0 out of 5.0
4.6 out of 5 (805 reviews)
Great location!! Awesome location! Clean rooms. Would go back to stay! - 

$198

$198
Hotel Sunroute Takadanobaba

Hotel Sunroute Takadanobaba

1-27-7 Takadanobaba, Shinjuku-ku, Tokyo
2.5 out of 5.0
4.3 out of 5 (36 reviews)
Cozy little hotel, very close to transit! The check in experience was a breeze. Location was great, super close to food, shops and the trains … - 

$77

$77
Nishitetsu Inn Shinjuku

Nishitetsu Inn Shinjuku

7-23-2 Nishi-shinjuku, Tokyo
3.0 out of 5.0
4.2 out of 5 (62 reviews)
Great stay, in very central location. I was a solo female traveller and found this hotel a great place to stay. The single rooms are an i … - 

$95

$95
Map

Recently booked Shinjuku hotels

APA Hotel Shinjuku Kabukicho Tower
3.0 out of 5.0
Last booking: 16 minutes ago
Shinjuku Granbell Hotel
4.0 out of 5.0
Last booking: 22 minutes ago
Century Southern Tower Hotel
4.0 out of 5.0
Last booking: 1 hour ago
Hotel Gracery Shinjuku
3.5 out of 5.0
Last booking: 1 hour ago
Shinjuku Kuyakushomae Capsule Hotel
1.5 out of 5.0
Last booking: 2 hours ago
Tokyu Stay Shinjuku
3.5 out of 5.0
Last booking: 2 hours ago
Citadines Central Shinjuku Tokyo
3.5 out of 5.0
Last booking: 3 hours ago
Hilton Tokyo
4.5 out of 5.0
Last booking: 4 hours ago
APA Hotel Shinjuku Gyoemmae
3.0 out of 5.0
Last booking: 7 hours ago

Pocket Guide: Independent Hotels in Shinjuku

Search for hotels in Shinjuku on Expedia. You can easily find your hotels in Shinjuku using one of the methods below:

  • View our selection of featured hotels in Shinjuku
  • Use the map to find hotels in the Shinjuku neighborhood you prefer
  • Use the filters to see hotels in a specific area of Shinjuku, select a specific theme, brand, or hotel class from basic (1 Star) to luxury hotels (5 Stars) in Shinjuku
  • Enter your travel dates to view the best deals on hotels in Shinjuku - while they last